Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AL162377.1-201ENST00000618844 1793 ntBASIC18.98■□□□□ 0.63
RNF6Q9Y252 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 AL512408.1-201ENST00000569378 2000 ntBASIC18.98■□□□□ 0.63
RNF6Q9Y252 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF6Q9Y252 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF6Q9Y252 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF6Q9Y252 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF6Q9Y252 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 AC087289.5-201ENST00000586076 3175 ntBASIC18.97■□□□□ 0.63
RNF6Q9Y252 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF6Q9Y252 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF6Q9Y252 KRT18P6-201ENST00000555540 1265 ntBASIC18.97■□□□□ 0.63
RNF6Q9Y252 AC138907.5-202ENST00000569484 235 ntBASIC18.97■□□□□ 0.63
RNF6Q9Y252 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF6Q9Y252 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF6Q9Y252 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF6Q9Y252 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF6Q9Y252 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF6Q9Y252 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 CNN2P6-201ENST00000439038 900 ntBASIC18.96■□□□□ 0.63
RNF6Q9Y252 TSPY20P-201ENST00000450910 630 ntBASIC18.96■□□□□ 0.63
RNF6Q9Y252 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 KRT18P20-201ENST00000548986 1279 ntBASIC18.96■□□□□ 0.63
RNF6Q9Y252 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF6Q9Y252 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF6Q9Y252 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF6Q9Y252 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF6Q9Y252 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF6Q9Y252 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF6Q9Y252 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF6Q9Y252 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RNF6Q9Y252 AF201337.1-201ENST00000520239 748 ntBASIC18.95■□□□□ 0.62
RNF6Q9Y252 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF6Q9Y252 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF6Q9Y252 AC010536.3-201ENST00000620306 533 ntBASIC18.95■□□□□ 0.62
RNF6Q9Y252 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF6Q9Y252 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF6Q9Y252 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF6Q9Y252 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 AL020996.1-203ENST00000536896 2307 ntBASIC18.94■□□□□ 0.62
RNF6Q9Y252 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms