Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC26.06■■□□□ 1.76
PDZRN3Q9UPQ7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 PKD1P6-201ENST00000343738 4769 ntBASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.05■■□□□ 1.76
PDZRN3Q9UPQ7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 FAM210CP-201ENST00000445714 574 ntBASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 AC245052.3-201ENST00000450182 901 ntBASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.04■■□□□ 1.76
PDZRN3Q9UPQ7 AC092368.3-202ENST00000574180 1591 ntBASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 Z99916.2-201ENST00000604037 246 ntBASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDZRN3Q9UPQ7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 REXO1L12P-201ENST00000622156 912 ntBASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDZRN3Q9UPQ7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
PDZRN3Q9UPQ7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 ECEL1P3-201ENST00000427961 737 ntBASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PDZRN3Q9UPQ7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
PDZRN3Q9UPQ7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms