Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 AC090192.1-201ENST00000517740 490 ntBASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGC3Q9UN70 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
PCDHGC3Q9UN70 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 AC092118.2-201ENST00000613495 667 ntBASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGC3Q9UN70 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 SLC29A4P1-201ENST00000398760 971 ntBASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGC3Q9UN70 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGC3Q9UN70 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
PCDHGC3Q9UN70 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms