Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 AC138907.5-202ENST00000569484 235 ntBASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMCC3Q9ULS5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 SMG8-203ENST00000578922 2178 ntBASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 AC110285.6-201ENST00000617652 491 ntBASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 AL358852.1-201ENST00000623174 1268 ntBASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMCC3Q9ULS5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMCC3Q9ULS5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 AL136967.2-201ENST00000623968 743 ntBASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMCC3Q9ULS5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 AL139246.5-201ENST00000606645 996 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms