Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GTF3C4Q9UKN8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
GTF3C4Q9UKN8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.78■■□□□ 1.08
GTF3C4Q9UKN8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 RNA5SP413-201ENST00000516373 109 ntBASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 MIR4651-201ENST00000582622 73 ntBASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GTF3C4Q9UKN8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
GTF3C4Q9UKN8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
GTF3C4Q9UKN8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.77■■□□□ 1.07
GTF3C4Q9UKN8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
GTF3C4Q9UKN8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 TSPY20P-201ENST00000450910 630 ntBASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GTF3C4Q9UKN8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 ABHD17AP1-201ENST00000358206 933 ntBASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.75■■□□□ 1.07
GTF3C4Q9UKN8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GTF3C4Q9UKN8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 AC087633.2-202ENST00000565166 1439 ntBASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 AC105020.6-201ENST00000621523 1217 ntBASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.73■■□□□ 1.07
GTF3C4Q9UKN8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms