Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.61■□□□□ 0.89
EBF1Q9UH73 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 AL049637.2-201ENST00000641778 930 ntBASIC20.61■□□□□ 0.89
EBF1Q9UH73 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 AC005829.2-201ENST00000571422 1056 ntBASIC20.6■□□□□ 0.89
EBF1Q9UH73 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF1Q9UH73 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.6■□□□□ 0.89
EBF1Q9UH73 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EBF1Q9UH73 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF1Q9UH73 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF1Q9UH73 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EBF1Q9UH73 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 AC239809.2-201ENST00000415381 517 ntBASIC20.59■□□□□ 0.89
EBF1Q9UH73 TSPY7P-201ENST00000431358 1114 ntBASIC20.59■□□□□ 0.89
EBF1Q9UH73 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF1Q9UH73 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.59■□□□□ 0.89
EBF1Q9UH73 AC110285.5-201ENST00000611501 352 ntBASIC20.59■□□□□ 0.89
EBF1Q9UH73 AL023875.1-201ENST00000640777 796 ntBASIC20.59■□□□□ 0.89
EBF1Q9UH73 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
EBF1Q9UH73 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF1Q9UH73 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF1Q9UH73 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
EBF1Q9UH73 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
EBF1Q9UH73 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EBF1Q9UH73 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.58■□□□□ 0.89
EBF1Q9UH73 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EBF1Q9UH73 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
EBF1Q9UH73 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EBF1Q9UH73 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EBF1Q9UH73 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EBF1Q9UH73 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EBF1Q9UH73 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
EBF1Q9UH73 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EBF1Q9UH73 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
EBF1Q9UH73 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EBF1Q9UH73 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EBF1Q9UH73 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EBF1Q9UH73 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.58■□□□□ 0.88
EBF1Q9UH73 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.58■□□□□ 0.88
EBF1Q9UH73 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.58■□□□□ 0.88
EBF1Q9UH73 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF1Q9UH73 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF1Q9UH73 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF1Q9UH73 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF1Q9UH73 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EBF1Q9UH73 PGM5P4-201ENST00000421970 445 ntBASIC20.57■□□□□ 0.88
EBF1Q9UH73 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
EBF1Q9UH73 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.57■□□□□ 0.88
EBF1Q9UH73 MIR4785-201ENST00000585005 73 ntBASIC20.57■□□□□ 0.88
EBF1Q9UH73 AC010331.1-201ENST00000611423 582 ntBASIC20.57■□□□□ 0.88
EBF1Q9UH73 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
EBF1Q9UH73 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.57■□□□□ 0.88
EBF1Q9UH73 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms