Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 KRT19P1-201ENST00000405746 1186 ntBASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 BX323043.1-201ENST00000641006 1765 ntBASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 AC104187.1-201ENST00000607510 612 ntBASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTI1BQ9UEU0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 KRT16P2-201ENST00000414673 1423 ntBASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTI1BQ9UEU0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTI1BQ9UEU0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 AC138907.5-202ENST00000569484 235 ntBASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTI1BQ9UEU0 AC116050.2-201ENST00000612102 1779 ntBASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 AC120498.10-201ENST00000621827 505 ntBASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VTI1BQ9UEU0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms