Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 TSPY15P-201ENST00000457163 923 ntBASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNMT3BQ9UBC3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 AC027702.1-201ENST00000563810 1770 ntBASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 RARRES2P10-201ENST00000564312 460 ntBASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.18■□□□□ 0.98
DNMT3BQ9UBC3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 PRKY-204ENST00000533551 1019 ntBASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
DNMT3BQ9UBC3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 LINC01023-201ENST00000606054 436 ntBASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNMT3BQ9UBC3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 KRT8P36-201ENST00000489121 1440 ntBASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 FAM210CP-201ENST00000445714 574 ntBASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 MIR4785-201ENST00000585005 73 ntBASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNMT3BQ9UBC3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms