Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR9Q9NR96 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 AL353807.1-201ENST00000427475 662 ntBASIC21.54■■□□□ 1.04
TLR9Q9NR96 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR9Q9NR96 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TLR9Q9NR96 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TLR9Q9NR96 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 MMP23A-201ENST00000234610 1017 ntBASIC21.53■■□□□ 1.04
TLR9Q9NR96 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR9Q9NR96 TMPOP1-202ENST00000424642 1267 ntBASIC21.53■■□□□ 1.04
TLR9Q9NR96 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR9Q9NR96 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR9Q9NR96 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR9Q9NR96 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR9Q9NR96 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR9Q9NR96 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TLR9Q9NR96 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR9Q9NR96 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.52■■□□□ 1.04
TLR9Q9NR96 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.52■■□□□ 1.04
TLR9Q9NR96 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.52■■□□□ 1.04
TLR9Q9NR96 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.52■■□□□ 1.04
TLR9Q9NR96 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR9Q9NR96 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.52■■□□□ 1.04
TLR9Q9NR96 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.52■■□□□ 1.04
TLR9Q9NR96 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TLR9Q9NR96 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.52■■□□□ 1.03
TLR9Q9NR96 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TLR9Q9NR96 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TLR9Q9NR96 NBPF21P-201ENST00000425093 1451 ntBASIC21.52■■□□□ 1.03
TLR9Q9NR96 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TLR9Q9NR96 LINC00565-201ENST00000562710 2331 ntBASIC21.51■■□□□ 1.03
TLR9Q9NR96 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TLR9Q9NR96 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TLR9Q9NR96 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TLR9Q9NR96 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.51■■□□□ 1.03
TLR9Q9NR96 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.51■■□□□ 1.03
TLR9Q9NR96 AC023632.3-201ENST00000521633 145 ntBASIC21.51■■□□□ 1.03
TLR9Q9NR96 AL445228.2-201ENST00000605589 952 ntBASIC21.51■■□□□ 1.03
TLR9Q9NR96 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TLR9Q9NR96 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TLR9Q9NR96 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TLR9Q9NR96 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
TLR9Q9NR96 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TLR9Q9NR96 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TLR9Q9NR96 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.5■■□□□ 1.03
TLR9Q9NR96 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.5■■□□□ 1.03
TLR9Q9NR96 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.5■■□□□ 1.03
TLR9Q9NR96 GUSBP5-202ENST00000510805 1989 ntBASIC21.5■■□□□ 1.03
TLR9Q9NR96 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.5■■□□□ 1.03
TLR9Q9NR96 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR9Q9NR96 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.49■■□□□ 1.03
TLR9Q9NR96 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.49■■□□□ 1.03
TLR9Q9NR96 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.49■■□□□ 1.03
TLR9Q9NR96 FAM197Y1-201ENST00000421178 764 ntBASIC21.49■■□□□ 1.03
TLR9Q9NR96 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms