Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 AC097658.1-201ENST00000475555 843 ntBASIC21.14■□□□□ 0.97
CD248Q9HCU0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CD248Q9HCU0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CD248Q9HCU0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.13■□□□□ 0.97
CD248Q9HCU0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.13■□□□□ 0.97
CD248Q9HCU0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD248Q9HCU0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CD248Q9HCU0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD248Q9HCU0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD248Q9HCU0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD248Q9HCU0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD248Q9HCU0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD248Q9HCU0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.12■□□□□ 0.97
CD248Q9HCU0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CD248Q9HCU0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CD248Q9HCU0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.11■□□□□ 0.97
CD248Q9HCU0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CD248Q9HCU0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CD248Q9HCU0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.11■□□□□ 0.97
CD248Q9HCU0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CD248Q9HCU0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.11■□□□□ 0.97
CD248Q9HCU0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.11■□□□□ 0.97
CD248Q9HCU0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD248Q9HCU0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CD248Q9HCU0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 KRT18P29-201ENST00000397031 1267 ntBASIC21.1■□□□□ 0.97
CD248Q9HCU0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.1■□□□□ 0.97
CD248Q9HCU0 AC098590.1-201ENST00000468126 897 ntBASIC21.1■□□□□ 0.97
CD248Q9HCU0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.1■□□□□ 0.97
CD248Q9HCU0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.1■□□□□ 0.97
CD248Q9HCU0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CD248Q9HCU0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD248Q9HCU0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CD248Q9HCU0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD248Q9HCU0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD248Q9HCU0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD248Q9HCU0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD248Q9HCU0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD248Q9HCU0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD248Q9HCU0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms