Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF556Q9HAH1 AC018445.3-201ENST00000624177 1945 ntBASIC18.68■□□□□ 0.58
ZNF556Q9HAH1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF556Q9HAH1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF556Q9HAH1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF556Q9HAH1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 AC245052.3-201ENST00000450182 901 ntBASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 AC024257.2-201ENST00000549699 147 ntBASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZNF556Q9HAH1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 AC135279.3-201ENST00000610945 1311 ntBASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF556Q9HAH1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 BX323043.1-201ENST00000641006 1765 ntBASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 BCL2-203ENST00000589955 5011 ntBASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 AC099791.1-201ENST00000416440 715 ntBASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF556Q9HAH1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
ZNF556Q9HAH1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF556Q9HAH1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 AC027682.1-201ENST00000562846 899 ntBASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 MIR2861-201ENST00000636310 90 ntBASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF556Q9HAH1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms