Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 AL355802.2-201ENST00000402069 882 ntBASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FOXP3Q9BZS1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
FOXP3Q9BZS1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.83■□□□□ 0.92
FOXP3Q9BZS1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FOXP3Q9BZS1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.83■□□□□ 0.92
FOXP3Q9BZS1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXP3Q9BZS1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXP3Q9BZS1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXP3Q9BZS1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 MIR663A-201ENST00000385250 93 ntBASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 KRT18P11-201ENST00000435214 1283 ntBASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 AL109923.1-201ENST00000618799 583 ntBASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXP3Q9BZS1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 AC138907.5-202ENST00000569484 235 ntBASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 AC104187.1-201ENST00000607510 612 ntBASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 AC120498.10-201ENST00000621827 505 ntBASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
FOXP3Q9BZS1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 AC116050.2-201ENST00000612102 1779 ntBASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 KRT87P-202ENST00000534226 1464 ntBASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXP3Q9BZS1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXP3Q9BZS1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms