Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSBP3Q9BWW4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 AC026310.3-201ENST00000625186 2373 ntBASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 KRT18P29-201ENST00000397031 1267 ntBASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 AP003097.1-201ENST00000530657 1135 ntBASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 MIR2861-201ENST00000636310 90 ntBASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSBP3Q9BWW4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.83■□□□□ 0.29
SSBP3Q9BWW4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.83■□□□□ 0.29
SSBP3Q9BWW4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 AC026366.1-201ENST00000488803 879 ntBASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 ITM2C-210ENST00000620962 501 ntBASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.83■□□□□ 0.28
SSBP3Q9BWW4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SSBP3Q9BWW4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 KRT8P36-201ENST00000489121 1440 ntBASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms