Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 AC116050.2-201ENST00000612102 1779 ntBASIC17.31■□□□□ 0.36
NICN1Q9BSH3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NICN1Q9BSH3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 AL358852.1-201ENST00000623174 1268 ntBASIC17.29■□□□□ 0.36
NICN1Q9BSH3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NICN1Q9BSH3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 SUDS3P1-201ENST00000505831 966 ntBASIC17.28■□□□□ 0.36
NICN1Q9BSH3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 AC120498.10-201ENST00000621827 505 ntBASIC17.28■□□□□ 0.36
NICN1Q9BSH3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NICN1Q9BSH3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms