Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK1Q99986 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK1Q99986 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VRK1Q99986 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.75■□□□□ 0.43
VRK1Q99986 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.75■□□□□ 0.43
VRK1Q99986 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.75■□□□□ 0.43
VRK1Q99986 AC243732.1-201ENST00000612648 864 ntBASIC17.75■□□□□ 0.43
VRK1Q99986 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.75■□□□□ 0.43
VRK1Q99986 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.75■□□□□ 0.43
VRK1Q99986 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VRK1Q99986 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK1Q99986 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK1Q99986 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK1Q99986 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK1Q99986 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VRK1Q99986 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
VRK1Q99986 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK1Q99986 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VRK1Q99986 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.74■□□□□ 0.43
VRK1Q99986 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.74■□□□□ 0.43
VRK1Q99986 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VRK1Q99986 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.74■□□□□ 0.43
VRK1Q99986 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.74■□□□□ 0.43
VRK1Q99986 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.74■□□□□ 0.43
VRK1Q99986 MIPEPP3-201ENST00000412105 444 ntBASIC17.74■□□□□ 0.43
VRK1Q99986 BX276092.2-201ENST00000417668 665 ntBASIC17.74■□□□□ 0.43
VRK1Q99986 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VRK1Q99986 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.74■□□□□ 0.43
VRK1Q99986 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 KRT18P6-201ENST00000555540 1265 ntBASIC17.74■□□□□ 0.43
VRK1Q99986 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.74■□□□□ 0.43
VRK1Q99986 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.74■□□□□ 0.43
VRK1Q99986 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
VRK1Q99986 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VRK1Q99986 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VRK1Q99986 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.74■□□□□ 0.43
VRK1Q99986 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VRK1Q99986 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.73■□□□□ 0.43
VRK1Q99986 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.73■□□□□ 0.43
VRK1Q99986 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VRK1Q99986 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VRK1Q99986 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VRK1Q99986 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.73■□□□□ 0.43
VRK1Q99986 AL512625.2-201ENST00000417533 625 ntBASIC17.73■□□□□ 0.43
VRK1Q99986 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.73■□□□□ 0.43
VRK1Q99986 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
VRK1Q99986 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VRK1Q99986 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.73■□□□□ 0.43
VRK1Q99986 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VRK1Q99986 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VRK1Q99986 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VRK1Q99986 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
VRK1Q99986 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.72■□□□□ 0.43
VRK1Q99986 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VRK1Q99986 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms