Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXC2Q99958 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXC2Q99958 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXC2Q99958 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXC2Q99958 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 AC004264.1-201ENST00000608354 794 ntBASIC17.07■□□□□ 0.32
FOXC2Q99958 AL356652.1-201ENST00000615962 565 ntBASIC17.07■□□□□ 0.32
FOXC2Q99958 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXC2Q99958 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
FOXC2Q99958 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXC2Q99958 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXC2Q99958 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXC2Q99958 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 CYP2D8P-201ENST00000433633 1490 ntBASIC17.06■□□□□ 0.32
FOXC2Q99958 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
FOXC2Q99958 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXC2Q99958 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXC2Q99958 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXC2Q99958 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXC2Q99958 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXC2Q99958 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXC2Q99958 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXC2Q99958 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXC2Q99958 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
FOXC2Q99958 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
FOXC2Q99958 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXC2Q99958 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXC2Q99958 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXC2Q99958 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXC2Q99958 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXC2Q99958 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXC2Q99958 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXC2Q99958 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
FOXC2Q99958 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXC2Q99958 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXC2Q99958 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXC2Q99958 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.05■□□□□ 0.32
FOXC2Q99958 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.05■□□□□ 0.32
FOXC2Q99958 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXC2Q99958 AC091076.1-201ENST00000610741 619 ntBASIC17.05■□□□□ 0.32
FOXC2Q99958 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXC2Q99958 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXC2Q99958 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXC2Q99958 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXC2Q99958 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXC2Q99958 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXC2Q99958 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXC2Q99958 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FOXC2Q99958 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXC2Q99958 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXC2Q99958 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXC2Q99958 LIN28AP1-201ENST00000429574 405 ntBASIC17.04■□□□□ 0.32
FOXC2Q99958 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.04■□□□□ 0.32
FOXC2Q99958 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXC2Q99958 AC116562.2-201ENST00000507042 360 ntBASIC17.04■□□□□ 0.32
FOXC2Q99958 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
FOXC2Q99958 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.04■□□□□ 0.32
FOXC2Q99958 WWOX-216ENST00000569818 525 ntBASIC17.04■□□□□ 0.32
FOXC2Q99958 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXC2Q99958 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXC2Q99958 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXC2Q99958 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms