Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMOQ99835 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.25■□□□□ 0.99
SMOQ99835 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMOQ99835 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.25■□□□□ 0.99
SMOQ99835 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMOQ99835 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.25■□□□□ 0.99
SMOQ99835 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMOQ99835 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SMOQ99835 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMOQ99835 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMOQ99835 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMOQ99835 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SMOQ99835 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMOQ99835 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMOQ99835 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMOQ99835 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.24■□□□□ 0.99
SMOQ99835 AC023632.3-201ENST00000521633 145 ntBASIC21.24■□□□□ 0.99
SMOQ99835 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.24■□□□□ 0.99
SMOQ99835 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
SMOQ99835 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SMOQ99835 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.24■□□□□ 0.99
SMOQ99835 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.24■□□□□ 0.99
SMOQ99835 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.24■□□□□ 0.99
SMOQ99835 DPP3P2-201ENST00000416030 1696 ntBASIC21.24■□□□□ 0.99
SMOQ99835 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMOQ99835 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SMOQ99835 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SMOQ99835 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMOQ99835 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
SMOQ99835 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.23■□□□□ 0.99
SMOQ99835 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMOQ99835 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SMOQ99835 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.23■□□□□ 0.99
SMOQ99835 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.23■□□□□ 0.99
SMOQ99835 AC006058.3-201ENST00000606217 1069 ntBASIC21.23■□□□□ 0.99
SMOQ99835 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.23■□□□□ 0.99
SMOQ99835 ITM2C-210ENST00000620962 501 ntBASIC21.23■□□□□ 0.99
SMOQ99835 TMEM191A-211ENST00000637163 1067 ntBASIC21.23■□□□□ 0.99
SMOQ99835 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.23■□□□□ 0.99
SMOQ99835 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.23■□□□□ 0.99
SMOQ99835 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SMOQ99835 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMOQ99835 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.22■□□□□ 0.99
SMOQ99835 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMOQ99835 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SMOQ99835 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMOQ99835 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.22■□□□□ 0.99
SMOQ99835 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.22■□□□□ 0.99
SMOQ99835 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMOQ99835 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.22■□□□□ 0.99
SMOQ99835 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.22■□□□□ 0.99
SMOQ99835 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SMOQ99835 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
SMOQ99835 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMOQ99835 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SMOQ99835 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
SMOQ99835 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
SMOQ99835 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
SMOQ99835 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.21■□□□□ 0.99
SMOQ99835 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.21■□□□□ 0.99
SMOQ99835 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.21■□□□□ 0.99
SMOQ99835 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 AC073314.1-201ENST00000568729 2216 ntBASIC21.21■□□□□ 0.99
SMOQ99835 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMOQ99835 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.2■□□□□ 0.99
SMOQ99835 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms