Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC6Q99741 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.59■□□□□ 0.73
CDC6Q99741 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC6Q99741 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.58■□□□□ 0.73
CDC6Q99741 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC6Q99741 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC6Q99741 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC6Q99741 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.58■□□□□ 0.73
CDC6Q99741 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDC6Q99741 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDC6Q99741 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC6Q99741 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.58■□□□□ 0.73
CDC6Q99741 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC6Q99741 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.58■□□□□ 0.73
CDC6Q99741 PKD1P6-201ENST00000343738 4769 ntBASIC19.58■□□□□ 0.73
CDC6Q99741 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC6Q99741 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC6Q99741 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC6Q99741 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.58■□□□□ 0.72
CDC6Q99741 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDC6Q99741 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDC6Q99741 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC6Q99741 RBM17P1-201ENST00000453646 1190 ntBASIC19.58■□□□□ 0.72
CDC6Q99741 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.58■□□□□ 0.72
CDC6Q99741 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.58■□□□□ 0.72
CDC6Q99741 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.58■□□□□ 0.72
CDC6Q99741 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.58■□□□□ 0.72
CDC6Q99741 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.58■□□□□ 0.72
CDC6Q99741 AL121906.2-201ENST00000621597 723 ntBASIC19.58■□□□□ 0.72
CDC6Q99741 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CDC6Q99741 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.58■□□□□ 0.72
CDC6Q99741 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC6Q99741 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC6Q99741 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC6Q99741 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC6Q99741 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC6Q99741 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDC6Q99741 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDC6Q99741 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC6Q99741 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC6Q99741 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC6Q99741 AP002982.1-201ENST00000492365 877 ntBASIC19.57■□□□□ 0.72
CDC6Q99741 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC6Q99741 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC6Q99741 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC6Q99741 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC6Q99741 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC6Q99741 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDC6Q99741 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
CDC6Q99741 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC6Q99741 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.56■□□□□ 0.72
CDC6Q99741 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC6Q99741 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC6Q99741 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC6Q99741 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC6Q99741 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDC6Q99741 AC005521.1-201ENST00000393351 872 ntBASIC19.56■□□□□ 0.72
CDC6Q99741 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.56■□□□□ 0.72
CDC6Q99741 AL031963.3-201ENST00000606441 850 ntBASIC19.56■□□□□ 0.72
CDC6Q99741 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDC6Q99741 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC6Q99741 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC6Q99741 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC6Q99741 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC6Q99741 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC6Q99741 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC6Q99741 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC6Q99741 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.55■□□□□ 0.72
CDC6Q99741 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC6Q99741 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDC6Q99741 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.55■□□□□ 0.72
CDC6Q99741 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC6Q99741 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.55■□□□□ 0.72
CDC6Q99741 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.55■□□□□ 0.72
CDC6Q99741 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC6Q99741 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.55■□□□□ 0.72
CDC6Q99741 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.55■□□□□ 0.72
CDC6Q99741 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDC6Q99741 LINC01568-207ENST00000641790 1380 ntBASIC19.55■□□□□ 0.72
CDC6Q99741 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC6Q99741 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDC6Q99741 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDC6Q99741 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC6Q99741 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC6Q99741 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC6Q99741 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC6Q99741 AC113347.1-201ENST00000413321 391 ntBASIC19.54■□□□□ 0.72
CDC6Q99741 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.54■□□□□ 0.72
CDC6Q99741 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC6Q99741 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.54■□□□□ 0.72
CDC6Q99741 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC6Q99741 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
CDC6Q99741 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC6Q99741 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC6Q99741 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDC6Q99741 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.54■□□□□ 0.72
CDC6Q99741 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC6Q99741 KRT18P22-201ENST00000402024 1347 ntBASIC19.53■□□□□ 0.72
CDC6Q99741 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC6Q99741 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms