Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 AC010542.4-201ENST00000563151 1910 ntBASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 AP000550.4-202ENST00000639755 178 ntBASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 INGX-201ENST00000359239 846 ntBASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 HCG4P8-203ENST00000443049 980 ntBASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CSMD1Q96PZ7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 ATP5G1P1-201ENST00000448724 379 ntBASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 AC063952.2-201ENST00000498792 1227 ntBASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 AK4P3-201ENST00000418260 669 ntBASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 AC246785.2-201ENST00000432512 513 ntBASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 AC006538.3-201ENST00000612495 578 ntBASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 AC073195.1-201ENST00000607241 877 ntBASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 AC093458.2-201ENST00000623150 629 ntBASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD1Q96PZ7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 KRT16P5-201ENST00000455284 522 ntBASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.28■□□□□ 0.36
CSMD1Q96PZ7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSMD1Q96PZ7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSMD1Q96PZ7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSMD1Q96PZ7 ECEL1P2-202ENST00000465689 757 ntBASIC17.27■□□□□ 0.36
CSMD1Q96PZ7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.27■□□□□ 0.36
CSMD1Q96PZ7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSMD1Q96PZ7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSMD1Q96PZ7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms