Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
C9orf72Q96LT7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 AC125437.2-201ENST00000625180 2167 ntBASIC20.75■□□□□ 0.91
C9orf72Q96LT7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf72Q96LT7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
C9orf72Q96LT7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 MIR2861-201ENST00000636310 90 ntBASIC20.73■□□□□ 0.91
C9orf72Q96LT7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 KRT87P-202ENST00000534226 1464 ntBASIC20.73■□□□□ 0.91
C9orf72Q96LT7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf72Q96LT7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 AC245052.3-201ENST00000450182 901 ntBASIC20.72■□□□□ 0.91
C9orf72Q96LT7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms