Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.99■■□□□ 1.11
LRCH3Q96II8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.99■■□□□ 1.11
LRCH3Q96II8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH3Q96II8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 AP002982.1-201ENST00000492365 877 ntBASIC21.98■■□□□ 1.11
LRCH3Q96II8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH3Q96II8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 AC023511.2-201ENST00000618803 211 ntBASIC21.98■■□□□ 1.11
LRCH3Q96II8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH3Q96II8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH3Q96II8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH3Q96II8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH3Q96II8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.98■■□□□ 1.11
LRCH3Q96II8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.97■■□□□ 1.11
LRCH3Q96II8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.97■■□□□ 1.11
LRCH3Q96II8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.97■■□□□ 1.11
LRCH3Q96II8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.97■■□□□ 1.11
LRCH3Q96II8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
LRCH3Q96II8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH3Q96II8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.97■■□□□ 1.11
LRCH3Q96II8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH3Q96II8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH3Q96II8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH3Q96II8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH3Q96II8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH3Q96II8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH3Q96II8 AC091390.4-202ENST00000476426 537 ntBASIC21.96■■□□□ 1.11
LRCH3Q96II8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 AC012313.10-201ENST00000623509 926 ntBASIC21.96■■□□□ 1.11
LRCH3Q96II8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.96■■□□□ 1.11
LRCH3Q96II8 CLDN5-201ENST00000403084 2357 ntBASIC21.96■■□□□ 1.11
LRCH3Q96II8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH3Q96II8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
LRCH3Q96II8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH3Q96II8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH3Q96II8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH3Q96II8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH3Q96II8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH3Q96II8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.95■■□□□ 1.1
LRCH3Q96II8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 AL121906.2-201ENST00000621597 723 ntBASIC21.95■■□□□ 1.1
LRCH3Q96II8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.95■■□□□ 1.1
LRCH3Q96II8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH3Q96II8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH3Q96II8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH3Q96II8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH3Q96II8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH3Q96II8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH3Q96II8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH3Q96II8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.94■■□□□ 1.1
LRCH3Q96II8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LRCH3Q96II8 AC128688.1-201ENST00000487626 519 ntBASIC21.94■■□□□ 1.1
LRCH3Q96II8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.94■■□□□ 1.1
LRCH3Q96II8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.94■■□□□ 1.1
LRCH3Q96II8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH3Q96II8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.94■■□□□ 1.1
LRCH3Q96II8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH3Q96II8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms