Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTP4Q96DX8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTP4Q96DX8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTP4Q96DX8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTP4Q96DX8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTP4Q96DX8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTP4Q96DX8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTP4Q96DX8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTP4Q96DX8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTP4Q96DX8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTP4Q96DX8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 DUX4L16-201ENST00000555130 1264 ntBASIC20.65■□□□□ 0.9
RTP4Q96DX8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTP4Q96DX8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTP4Q96DX8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTP4Q96DX8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RTP4Q96DX8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTP4Q96DX8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.64■□□□□ 0.9
RTP4Q96DX8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 RARRES2P4-201ENST00000514074 484 ntBASIC20.64■□□□□ 0.89
RTP4Q96DX8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RTP4Q96DX8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RTP4Q96DX8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTP4Q96DX8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.64■□□□□ 0.89
RTP4Q96DX8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RTP4Q96DX8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTP4Q96DX8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTP4Q96DX8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTP4Q96DX8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 AC026185.1-201ENST00000445748 174 ntBASIC20.63■□□□□ 0.89
RTP4Q96DX8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTP4Q96DX8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTP4Q96DX8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTP4Q96DX8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTP4Q96DX8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
RTP4Q96DX8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTP4Q96DX8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTP4Q96DX8 AC068338.2-201ENST00000563278 1430 ntBASIC20.62■□□□□ 0.89
RTP4Q96DX8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RTP4Q96DX8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTP4Q96DX8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.62■□□□□ 0.89
RTP4Q96DX8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RTP4Q96DX8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTP4Q96DX8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTP4Q96DX8 AL691432.2-201ENST00000607222 2038 ntBASIC20.62■□□□□ 0.89
RTP4Q96DX8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTP4Q96DX8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTP4Q96DX8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.62■□□□□ 0.89
RTP4Q96DX8 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.62■□□□□ 0.89
RTP4Q96DX8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTP4Q96DX8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
RTP4Q96DX8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.62■□□□□ 0.89
RTP4Q96DX8 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.62■□□□□ 0.89
RTP4Q96DX8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.61■□□□□ 0.89
RTP4Q96DX8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTP4Q96DX8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTP4Q96DX8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTP4Q96DX8 PTBP1P-201ENST00000554374 1601 ntBASIC20.61■□□□□ 0.89
RTP4Q96DX8 AC125437.2-201ENST00000625180 2167 ntBASIC20.61■□□□□ 0.89
RTP4Q96DX8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTP4Q96DX8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTP4Q96DX8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTP4Q96DX8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.61■□□□□ 0.89
RTP4Q96DX8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.61■□□□□ 0.89
RTP4Q96DX8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTP4Q96DX8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTP4Q96DX8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTP4Q96DX8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTP4Q96DX8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.61■□□□□ 0.89
RTP4Q96DX8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTP4Q96DX8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms