Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BRF1Q92994 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.83■■□□□ 1.41
BRF1Q92994 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
BRF1Q92994 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.83■■□□□ 1.41
BRF1Q92994 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BRF1Q92994 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.83■■□□□ 1.41
BRF1Q92994 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.83■■□□□ 1.41
BRF1Q92994 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.83■■□□□ 1.41
BRF1Q92994 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
BRF1Q92994 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BRF1Q92994 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.83■■□□□ 1.41
BRF1Q92994 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
BRF1Q92994 AC010980.2-201ENST00000587099 1412 ntBASIC23.83■■□□□ 1.4
BRF1Q92994 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
BRF1Q92994 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.82■■□□□ 1.4
BRF1Q92994 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.82■■□□□ 1.4
BRF1Q92994 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.82■■□□□ 1.4
BRF1Q92994 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.82■■□□□ 1.4
BRF1Q92994 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 AC026185.1-201ENST00000445748 174 ntBASIC23.82■■□□□ 1.4
BRF1Q92994 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 CYP2T3P-201ENST00000601990 817 ntBASIC23.82■■□□□ 1.4
BRF1Q92994 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.82■■□□□ 1.4
BRF1Q92994 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
BRF1Q92994 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BRF1Q92994 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.82■■□□□ 1.4
BRF1Q92994 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
BRF1Q92994 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.81■■□□□ 1.4
BRF1Q92994 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.81■■□□□ 1.4
BRF1Q92994 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
BRF1Q92994 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
BRF1Q92994 MIR663A-201ENST00000385250 93 ntBASIC23.81■■□□□ 1.4
BRF1Q92994 CROCCP5-201ENST00000436658 830 ntBASIC23.81■■□□□ 1.4
BRF1Q92994 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.81■■□□□ 1.4
BRF1Q92994 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRF1Q92994 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRF1Q92994 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.81■■□□□ 1.4
BRF1Q92994 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.81■■□□□ 1.4
BRF1Q92994 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.81■■□□□ 1.4
BRF1Q92994 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRF1Q92994 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRF1Q92994 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
BRF1Q92994 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRF1Q92994 KRT18P68-201ENST00000392293 1000 ntBASIC23.8■■□□□ 1.4
BRF1Q92994 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.8■■□□□ 1.4
BRF1Q92994 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.8■■□□□ 1.4
BRF1Q92994 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.8■■□□□ 1.4
BRF1Q92994 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRF1Q92994 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRF1Q92994 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.8■■□□□ 1.4
BRF1Q92994 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BRF1Q92994 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.8■■□□□ 1.4
BRF1Q92994 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.8■■□□□ 1.4
BRF1Q92994 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRF1Q92994 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.79■■□□□ 1.4
BRF1Q92994 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRF1Q92994 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRF1Q92994 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
BRF1Q92994 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
BRF1Q92994 AC105020.6-201ENST00000621523 1217 ntBASIC23.79■■□□□ 1.4
BRF1Q92994 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
BRF1Q92994 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRF1Q92994 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRF1Q92994 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRF1Q92994 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRF1Q92994 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.79■■□□□ 1.4
BRF1Q92994 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.79■■□□□ 1.4
BRF1Q92994 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRF1Q92994 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.78■■□□□ 1.4
BRF1Q92994 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
BRF1Q92994 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.78■■□□□ 1.4
BRF1Q92994 AL512625.2-201ENST00000417533 625 ntBASIC23.78■■□□□ 1.4
BRF1Q92994 AC133552.2-202ENST00000575694 574 ntBASIC23.78■■□□□ 1.4
BRF1Q92994 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.78■■□□□ 1.4
BRF1Q92994 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.78■■□□□ 1.4
BRF1Q92994 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF1Q92994 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
BRF1Q92994 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.78■■□□□ 1.4
BRF1Q92994 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BRF1Q92994 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
BRF1Q92994 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BRF1Q92994 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms