Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SMARCC1Q92922 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SMARCC1Q92922 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMARCC1Q92922 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMARCC1Q92922 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SMARCC1Q92922 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMARCC1Q92922 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.01■■□□□ 1.75
SMARCC1Q92922 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.01■■□□□ 1.75
SMARCC1Q92922 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.01■■□□□ 1.75
SMARCC1Q92922 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SMARCC1Q92922 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26■■□□□ 1.75
SMARCC1Q92922 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26■■□□□ 1.75
SMARCC1Q92922 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC1Q92922 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SMARCC1Q92922 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26■■□□□ 1.75
SMARCC1Q92922 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC1Q92922 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC26■■□□□ 1.75
SMARCC1Q92922 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26■■□□□ 1.75
SMARCC1Q92922 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
SMARCC1Q92922 NAPSB-206ENST00000562112 1266 ntBASIC26■■□□□ 1.75
SMARCC1Q92922 NME3-204ENST00000563498 920 ntTSL 2 BASIC26■■□□□ 1.75
SMARCC1Q92922 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC1Q92922 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26■■□□□ 1.75
SMARCC1Q92922 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26■■□□□ 1.75
SMARCC1Q92922 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC1Q92922 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26■■□□□ 1.75
SMARCC1Q92922 C9orf163-202ENST00000624034 2573 ntBASIC26■■□□□ 1.75
SMARCC1Q92922 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.99■■□□□ 1.75
SMARCC1Q92922 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SMARCC1Q92922 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC1Q92922 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC1Q92922 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC1Q92922 AC116562.2-201ENST00000507042 360 ntBASIC25.99■■□□□ 1.75
SMARCC1Q92922 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.99■■□□□ 1.75
SMARCC1Q92922 FITM1-202ENST00000559294 800 ntBASIC25.99■■□□□ 1.75
SMARCC1Q92922 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25.99■■□□□ 1.75
SMARCC1Q92922 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.99■■□□□ 1.75
SMARCC1Q92922 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.99■■□□□ 1.75
SMARCC1Q92922 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC1Q92922 AC027702.1-201ENST00000563810 1770 ntBASIC25.99■■□□□ 1.75
SMARCC1Q92922 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC1Q92922 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
SMARCC1Q92922 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC1Q92922 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC1Q92922 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC1Q92922 KRT18P22-201ENST00000402024 1347 ntBASIC25.98■■□□□ 1.75
SMARCC1Q92922 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC1Q92922 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.98■■□□□ 1.75
SMARCC1Q92922 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.98■■□□□ 1.75
SMARCC1Q92922 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC1Q92922 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.98■■□□□ 1.75
SMARCC1Q92922 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25.98■■□□□ 1.75
SMARCC1Q92922 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.98■■□□□ 1.75
SMARCC1Q92922 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC1Q92922 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.98■■□□□ 1.75
SMARCC1Q92922 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC1Q92922 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.97■■□□□ 1.75
SMARCC1Q92922 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
SMARCC1Q92922 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.97■■□□□ 1.75
SMARCC1Q92922 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.97■■□□□ 1.75
SMARCC1Q92922 KSR1P1-201ENST00000446298 240 ntBASIC25.97■■□□□ 1.75
SMARCC1Q92922 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.97■■□□□ 1.75
SMARCC1Q92922 MIR2861-201ENST00000636310 90 ntBASIC25.97■■□□□ 1.75
SMARCC1Q92922 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC1Q92922 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
SMARCC1Q92922 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SMARCC1Q92922 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC1Q92922 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC1Q92922 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.96■■□□□ 1.75
SMARCC1Q92922 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
SMARCC1Q92922 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC1Q92922 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.96■■□□□ 1.75
SMARCC1Q92922 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC1Q92922 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.96■■□□□ 1.75
SMARCC1Q92922 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.96■■□□□ 1.75
SMARCC1Q92922 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC1Q92922 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC1Q92922 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC1Q92922 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SMARCC1Q92922 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
SMARCC1Q92922 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.95■■□□□ 1.75
SMARCC1Q92922 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.95■■□□□ 1.75
SMARCC1Q92922 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SMARCC1Q92922 KRT18P57-201ENST00000443599 1254 ntBASIC25.95■■□□□ 1.74
SMARCC1Q92922 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.95■■□□□ 1.74
SMARCC1Q92922 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.95■■□□□ 1.74
SMARCC1Q92922 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
SMARCC1Q92922 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
SMARCC1Q92922 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.94■■□□□ 1.74
SMARCC1Q92922 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms