Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 AL035685.1-201ENST00000636663 812 ntBASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 AC093503.3-201ENST00000624917 2352 ntBASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB1Q8WWH5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 AC126544.1-201ENST00000580842 1059 ntBASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 AC061975.6-201ENST00000579045 1553 ntBASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.47■□□□□ 0.55
TRUB1Q8WWH5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 AC105233.4-201ENST00000642045 216 ntBASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.46■□□□□ 0.55
TRUB1Q8WWH5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRUB1Q8WWH5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 AC005332.7-201ENST00000614046 2005 ntBASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 LTB4R2-202ENST00000528054 3092 ntBASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms