Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC9Q8TBE3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 C2orf69P4-201ENST00000565394 541 ntBASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
FNDC9Q8TBE3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 FAM201B-201ENST00000458407 597 ntBASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 MIR2861-201ENST00000636310 90 ntBASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 HLA-B-256ENST00000639848 1089 ntBASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC9Q8TBE3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC9Q8TBE3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.14■□□□□ 0.5
FNDC9Q8TBE3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.14■□□□□ 0.5
FNDC9Q8TBE3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
FNDC9Q8TBE3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
FNDC9Q8TBE3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
FNDC9Q8TBE3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 AC060766.5-201ENST00000590539 871 ntBASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FNDC9Q8TBE3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms