Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
COL22A1Q8NFW1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 FAM87A-204ENST00000613235 858 ntBASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 AP000550.4-202ENST00000639755 178 ntBASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL22A1Q8NFW1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 SAPCD2P2-201ENST00000431719 1174 ntBASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 ATP5G1P1-201ENST00000448724 379 ntBASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 EGLN1P1-201ENST00000531623 762 ntBASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL22A1Q8NFW1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
COL22A1Q8NFW1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL22A1Q8NFW1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC27.29■■□□□ 1.96
COL22A1Q8NFW1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC27.29■■□□□ 1.96
COL22A1Q8NFW1 AC080038.3-201ENST00000623346 1952 ntBASIC27.29■■□□□ 1.96
COL22A1Q8NFW1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC27.28■■□□□ 1.96
COL22A1Q8NFW1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 COPE-203ENST00000351079 907 ntTSL 2 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 ABBA01031674.1-201ENST00000635145 728 ntBASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 AL031985.4-201ENST00000642138 673 ntBASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
COL22A1Q8NFW1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.96
COL22A1Q8NFW1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC27.26■■□□□ 1.95
COL22A1Q8NFW1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL22A1Q8NFW1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL22A1Q8NFW1 B3GAT3P1-201ENST00000471720 806 ntBASIC27.26■■□□□ 1.95
COL22A1Q8NFW1 DBP-204ENST00000599385 709 ntTSL 3 BASIC27.26■■□□□ 1.95
COL22A1Q8NFW1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL22A1Q8NFW1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC27.26■■□□□ 1.95
COL22A1Q8NFW1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC27.25■■□□□ 1.95
COL22A1Q8NFW1 AC091390.4-202ENST00000476426 537 ntBASIC27.24■■□□□ 1.95
COL22A1Q8NFW1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC27.24■■□□□ 1.95
COL22A1Q8NFW1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC27.24■■□□□ 1.95
COL22A1Q8NFW1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL22A1Q8NFW1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
COL22A1Q8NFW1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL22A1Q8NFW1 FSCN1P1-201ENST00000568912 1481 ntBASIC27.24■■□□□ 1.95
COL22A1Q8NFW1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL22A1Q8NFW1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms