Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 CYP21A1P-202ENST00000354927 1481 ntBASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 DUX4L16-201ENST00000555130 1264 ntBASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 AL356652.1-201ENST00000615962 565 ntBASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 AC100791.3-201ENST00000617619 330 ntBASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSMEM1Q8N8F7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 AC016405.3-201ENST00000607710 860 ntBASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 MIR5787-201ENST00000611784 55 ntBASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 SMG8-203ENST00000578922 2178 ntBASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSMEM1Q8N8F7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 CNN2P6-201ENST00000439038 900 ntBASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSMEM1Q8N8F7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 AL162430.1-201ENST00000480705 870 ntBASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 RARRES2P4-201ENST00000514074 484 ntBASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 AC011767.1-201ENST00000617410 1153 ntBASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms