Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 PNMA6B-201ENST00000538162 1200 ntBASIC20■□□□□ 0.79
TRAM1L1Q8N609 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 FEM1AP1-201ENST00000431297 1995 ntBASIC20■□□□□ 0.79
TRAM1L1Q8N609 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 AP005212.1-201ENST00000581547 1997 ntBASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 PTBP1P-201ENST00000554374 1601 ntBASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 AC073314.1-201ENST00000568729 2216 ntBASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAM1L1Q8N609 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAM1L1Q8N609 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 UNC93B5-201ENST00000530315 699 ntBASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 AC005829.2-201ENST00000571422 1056 ntBASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAM1L1Q8N609 GABARAPL3-202ENST00000624044 1851 ntBASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms