Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 AL355355.2-201ENST00000442321 338 ntBASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 AL353708.3-201ENST00000610272 989 ntBASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TMEFF1Q8IYR6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 HTR7P1-201ENST00000538670 1336 ntBASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TMEFF1Q8IYR6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
TMEFF1Q8IYR6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 AF186192.3-201ENST00000583427 947 ntBASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEFF1Q8IYR6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 TMPOP1-202ENST00000424642 1267 ntBASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 CD177P1-201ENST00000606252 935 ntBASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 AC124283.5-201ENST00000624661 1809 ntBASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TMEFF1Q8IYR6 FBXW4P1-201ENST00000426721 2239 ntBASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 MMP23A-201ENST00000234610 1017 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms