Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF135Q8IUD6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 KRASP1-201ENST00000407852 552 ntBASIC21.43■■□□□ 1.02
RNF135Q8IUD6 AC245052.3-201ENST00000450182 901 ntBASIC21.43■■□□□ 1.02
RNF135Q8IUD6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 RARRES2P10-201ENST00000564312 460 ntBASIC21.43■■□□□ 1.02
RNF135Q8IUD6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF135Q8IUD6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF135Q8IUD6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF135Q8IUD6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.4■■□□□ 1.02
RNF135Q8IUD6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 MMP23A-201ENST00000234610 1017 ntBASIC21.4■■□□□ 1.02
RNF135Q8IUD6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF135Q8IUD6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.39■■□□□ 1.02
RNF135Q8IUD6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF135Q8IUD6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF135Q8IUD6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.39■■□□□ 1.02
RNF135Q8IUD6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms