Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 AL023875.1-201ENST00000640777 796 ntBASIC22.61■■□□□ 1.21
TRIM50Q86XT4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 PLK5-205ENST00000642079 1969 ntBASIC22.6■■□□□ 1.21
TRIM50Q86XT4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.6■■□□□ 1.21
TRIM50Q86XT4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 Z99916.2-201ENST00000604037 246 ntBASIC22.6■■□□□ 1.21
TRIM50Q86XT4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM50Q86XT4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 AL390719.1-204ENST00000412397 1219 ntBASIC22.59■■□□□ 1.21
TRIM50Q86XT4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM50Q86XT4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 AC124016.1-201ENST00000609552 612 ntBASIC22.58■■□□□ 1.21
TRIM50Q86XT4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
TRIM50Q86XT4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM50Q86XT4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM50Q86XT4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM50Q86XT4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.58■■□□□ 1.2
TRIM50Q86XT4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM50Q86XT4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM50Q86XT4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TRIM50Q86XT4 AL121603.2-201ENST00000557373 2117 ntBASIC22.57■■□□□ 1.2
TRIM50Q86XT4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM50Q86XT4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM50Q86XT4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM50Q86XT4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
TRIM50Q86XT4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TRIM50Q86XT4 AC124283.5-201ENST00000624661 1809 ntBASIC22.57■■□□□ 1.2
TRIM50Q86XT4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
TRIM50Q86XT4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 AC239809.2-201ENST00000415381 517 ntBASIC22.56■■□□□ 1.2
TRIM50Q86XT4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 AC079834.2-201ENST00000609776 1949 ntBASIC22.56■■□□□ 1.2
TRIM50Q86XT4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms