Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 AC233702.5-201ENST00000584107 538 ntBASIC20.66■□□□□ 0.9
C12orf40Q86WS4 AC110285.5-201ENST00000611501 352 ntBASIC20.66■□□□□ 0.9
C12orf40Q86WS4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf40Q86WS4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 RPS2P55-201ENST00000397318 883 ntBASIC20.65■□□□□ 0.9
C12orf40Q86WS4 AC012618.2-201ENST00000428058 849 ntBASIC20.65■□□□□ 0.9
C12orf40Q86WS4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 AC107956.1-201ENST00000494359 873 ntBASIC20.65■□□□□ 0.9
C12orf40Q86WS4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf40Q86WS4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
C12orf40Q86WS4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C12orf40Q86WS4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 TSPY7P-201ENST00000431358 1114 ntBASIC20.64■□□□□ 0.89
C12orf40Q86WS4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.64■□□□□ 0.89
C12orf40Q86WS4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf40Q86WS4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 AC023632.3-201ENST00000521633 145 ntBASIC20.62■□□□□ 0.89
C12orf40Q86WS4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.62■□□□□ 0.89
C12orf40Q86WS4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 PLK5-205ENST00000642079 1969 ntBASIC20.62■□□□□ 0.89
C12orf40Q86WS4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf40Q86WS4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf40Q86WS4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf40Q86WS4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf40Q86WS4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf40Q86WS4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.61■□□□□ 0.89
C12orf40Q86WS4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf40Q86WS4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms