Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PACS2Q86VP3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PACS2Q86VP3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PACS2Q86VP3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 RASA4CP-201ENST00000424092 1398 ntBASIC20.24■□□□□ 0.83
PACS2Q86VP3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.24■□□□□ 0.83
PACS2Q86VP3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PACS2Q86VP3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PACS2Q86VP3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.24■□□□□ 0.83
PACS2Q86VP3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS2Q86VP3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS2Q86VP3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS2Q86VP3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS2Q86VP3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS2Q86VP3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS2Q86VP3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 AC099398.1-201ENST00000567919 2776 ntBASIC20.23■□□□□ 0.83
PACS2Q86VP3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
PACS2Q86VP3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS2Q86VP3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS2Q86VP3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PACS2Q86VP3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.22■□□□□ 0.83
PACS2Q86VP3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 AC099791.1-201ENST00000416440 715 ntBASIC20.22■□□□□ 0.83
PACS2Q86VP3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.22■□□□□ 0.83
PACS2Q86VP3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.22■□□□□ 0.83
PACS2Q86VP3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PACS2Q86VP3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.22■□□□□ 0.83
PACS2Q86VP3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.22■□□□□ 0.83
PACS2Q86VP3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS2Q86VP3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 AC139713.2-201ENST00000641328 2723 ntBASIC20.21■□□□□ 0.83
PACS2Q86VP3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PACS2Q86VP3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PACS2Q86VP3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PACS2Q86VP3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PACS2Q86VP3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PACS2Q86VP3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PACS2Q86VP3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PACS2Q86VP3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 AC126544.1-201ENST00000580842 1059 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms