Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 AC092720.2-201ENST00000602388 1665 ntBASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 AP005212.1-201ENST00000581547 1997 ntBASIC20.3■□□□□ 0.84
LYSMD3Q7Z3D4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 AC069152.1-201ENST00000438030 544 ntBASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 AC091874.3-201ENST00000512672 1195 ntBASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LYSMD3Q7Z3D4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 AC133041.1-202ENST00000642053 222 ntBASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.28■□□□□ 0.84
LYSMD3Q7Z3D4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 AC020907.5-201ENST00000624372 1936 ntBASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 AC073210.2-201ENST00000430369 194 ntBASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 C2orf69P4-201ENST00000565394 541 ntBASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD3Q7Z3D4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
LYSMD3Q7Z3D4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LYSMD3Q7Z3D4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.27■□□□□ 0.83
LYSMD3Q7Z3D4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LYSMD3Q7Z3D4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms