Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDHR3Q6ZTQ4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDHR3Q6ZTQ4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 MYCNOS-205ENST00000641950 531 ntBASIC20.27■□□□□ 0.84
CDHR3Q6ZTQ4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDHR3Q6ZTQ4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDHR3Q6ZTQ4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
CDHR3Q6ZTQ4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 KRT18P20-201ENST00000548986 1279 ntBASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 MIR2861-201ENST00000636310 90 ntBASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CDHR3Q6ZTQ4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 AC008175.2-201ENST00000612840 297 ntBASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.25■□□□□ 0.83
CDHR3Q6ZTQ4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 AC026185.1-201ENST00000445748 174 ntBASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms