Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD4Q5XG99 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 AP000525.1-201ENST00000608286 694 ntBASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LYSMD4Q5XG99 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 AL031963.3-201ENST00000606441 850 ntBASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 REXO1L10P-201ENST00000615707 1290 ntBASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD4Q5XG99 AC079598.2-202ENST00000546624 1451 ntBASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 MIR1238-201ENST00000408483 83 ntBASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD4Q5XG99 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 AC005521.1-201ENST00000393351 872 ntBASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 KRT8P36-201ENST00000489121 1440 ntBASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 KRT8P9-201ENST00000558927 1449 ntBASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LYSMD4Q5XG99 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 LINC01568-207ENST00000641790 1380 ntBASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
LYSMD4Q5XG99 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
LYSMD4Q5XG99 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
LYSMD4Q5XG99 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms