Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 PLK5-205ENST00000642079 1969 ntBASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 AC027702.1-201ENST00000563810 1770 ntBASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39BQ5VTQ0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 AP005212.1-201ENST00000581547 1997 ntBASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 AL356652.1-201ENST00000615962 565 ntBASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39BQ5VTQ0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
TTC39BQ5VTQ0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
TTC39BQ5VTQ0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TTC39BQ5VTQ0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TTC39BQ5VTQ0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TTC39BQ5VTQ0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 KRT18P6-201ENST00000555540 1265 ntBASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC39BQ5VTQ0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms