Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.83■□□□□ 0.77
RIF1Q5UIP0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.83■□□□□ 0.77
RIF1Q5UIP0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.83■□□□□ 0.77
RIF1Q5UIP0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.83■□□□□ 0.77
RIF1Q5UIP0 AC111152.3-201ENST00000569699 673 ntBASIC19.83■□□□□ 0.77
RIF1Q5UIP0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.83■□□□□ 0.76
RIF1Q5UIP0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIF1Q5UIP0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIF1Q5UIP0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIF1Q5UIP0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.83■□□□□ 0.76
RIF1Q5UIP0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.83■□□□□ 0.76
RIF1Q5UIP0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.83■□□□□ 0.76
RIF1Q5UIP0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.82■□□□□ 0.76
RIF1Q5UIP0 MESTP1-201ENST00000404287 994 ntBASIC19.82■□□□□ 0.76
RIF1Q5UIP0 TSPY21P-201ENST00000433481 731 ntBASIC19.82■□□□□ 0.76
RIF1Q5UIP0 TSPY23P-201ENST00000440136 739 ntBASIC19.82■□□□□ 0.76
RIF1Q5UIP0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.82■□□□□ 0.76
RIF1Q5UIP0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIF1Q5UIP0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 KRT17P6-201ENST00000453795 1220 ntBASIC19.81■□□□□ 0.76
RIF1Q5UIP0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 IER3-202ENST00000376377 1350 ntBASIC19.81■□□□□ 0.76
RIF1Q5UIP0 AC116050.2-201ENST00000612102 1779 ntBASIC19.81■□□□□ 0.76
RIF1Q5UIP0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 AL671277.2-201ENST00000458060 996 ntBASIC19.81■□□□□ 0.76
RIF1Q5UIP0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIF1Q5UIP0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 AC087742.1-201ENST00000575880 1738 ntBASIC19.8■□□□□ 0.76
RIF1Q5UIP0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 CKBP1-201ENST00000565489 1086 ntBASIC19.8■□□□□ 0.76
RIF1Q5UIP0 AL445675.2-201ENST00000620291 557 ntBASIC19.8■□□□□ 0.76
RIF1Q5UIP0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RIF1Q5UIP0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.79■□□□□ 0.76
RIF1Q5UIP0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.79■□□□□ 0.76
RIF1Q5UIP0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 AC011506.1-201ENST00000474329 610 ntBASIC19.78■□□□□ 0.76
RIF1Q5UIP0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 AC139530.1-201ENST00000575312 1977 ntBASIC19.78■□□□□ 0.76
RIF1Q5UIP0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 AC097488.1-201ENST00000507834 756 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms