Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RUNDC3AQ59EK9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 BX119927.1-201ENST00000636596 1552 ntBASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUNDC3AQ59EK9 AC087289.5-201ENST00000586076 3175 ntBASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RUNDC3AQ59EK9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 SLC7A5P1-201ENST00000568957 537 ntBASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RUNDC3AQ59EK9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 BX323043.1-201ENST00000641006 1765 ntBASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 AC105265.2-201ENST00000467189 838 ntBASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.04■□□□□ 0.64
RUNDC3AQ59EK9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.03■□□□□ 0.64
RUNDC3AQ59EK9 FAM21FP-204ENST00000608637 956 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms