Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNB3Q15768 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFNB3Q15768 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFNB3Q15768 AC023632.3-201ENST00000521633 145 ntBASIC17.26■□□□□ 0.35
EFNB3Q15768 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
EFNB3Q15768 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNB3Q15768 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.26■□□□□ 0.35
EFNB3Q15768 AC142381.4-202ENST00000563973 229 ntBASIC17.26■□□□□ 0.35
EFNB3Q15768 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNB3Q15768 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNB3Q15768 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.25■□□□□ 0.35
EFNB3Q15768 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
EFNB3Q15768 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EFNB3Q15768 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EFNB3Q15768 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.25■□□□□ 0.35
EFNB3Q15768 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.25■□□□□ 0.35
EFNB3Q15768 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.25■□□□□ 0.35
EFNB3Q15768 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.25■□□□□ 0.35
EFNB3Q15768 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.25■□□□□ 0.35
EFNB3Q15768 AC069544.1-201ENST00000609399 999 ntBASIC17.25■□□□□ 0.35
EFNB3Q15768 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
EFNB3Q15768 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNB3Q15768 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.25■□□□□ 0.35
EFNB3Q15768 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFNB3Q15768 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.24■□□□□ 0.35
EFNB3Q15768 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.24■□□□□ 0.35
EFNB3Q15768 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFNB3Q15768 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
EFNB3Q15768 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EFNB3Q15768 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
EFNB3Q15768 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
EFNB3Q15768 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFNB3Q15768 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.24■□□□□ 0.35
EFNB3Q15768 RPS2P52-201ENST00000469610 820 ntBASIC17.24■□□□□ 0.35
EFNB3Q15768 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
EFNB3Q15768 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.24■□□□□ 0.35
EFNB3Q15768 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EFNB3Q15768 RN7SL471P-201ENST00000580476 299 ntBASIC17.24■□□□□ 0.35
EFNB3Q15768 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.24■□□□□ 0.35
EFNB3Q15768 AP006294.2-201ENST00000641667 209 ntBASIC17.24■□□□□ 0.35
EFNB3Q15768 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.24■□□□□ 0.35
EFNB3Q15768 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.24■□□□□ 0.35
EFNB3Q15768 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFNB3Q15768 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
EFNB3Q15768 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.24■□□□□ 0.35
EFNB3Q15768 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFNB3Q15768 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.23■□□□□ 0.35
EFNB3Q15768 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFNB3Q15768 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFNB3Q15768 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFNB3Q15768 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFNB3Q15768 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.23■□□□□ 0.35
EFNB3Q15768 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
EFNB3Q15768 AL158047.1-201ENST00000445918 881 ntBASIC17.23■□□□□ 0.35
EFNB3Q15768 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
EFNB3Q15768 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.23■□□□□ 0.35
EFNB3Q15768 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.23■□□□□ 0.35
EFNB3Q15768 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
EFNB3Q15768 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.23■□□□□ 0.35
EFNB3Q15768 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFNB3Q15768 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.23■□□□□ 0.35
EFNB3Q15768 AC120498.8-201ENST00000614275 531 ntBASIC17.23■□□□□ 0.35
EFNB3Q15768 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.23■□□□□ 0.35
EFNB3Q15768 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EFNB3Q15768 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
EFNB3Q15768 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.23■□□□□ 0.35
EFNB3Q15768 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EFNB3Q15768 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFNB3Q15768 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFNB3Q15768 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.23■□□□□ 0.35
EFNB3Q15768 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFNB3Q15768 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.22■□□□□ 0.35
EFNB3Q15768 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.22■□□□□ 0.35
EFNB3Q15768 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.22■□□□□ 0.35
EFNB3Q15768 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFNB3Q15768 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFNB3Q15768 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EFNB3Q15768 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFNB3Q15768 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.22■□□□□ 0.35
EFNB3Q15768 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.22■□□□□ 0.35
EFNB3Q15768 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.22■□□□□ 0.35
EFNB3Q15768 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.22■□□□□ 0.35
EFNB3Q15768 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.22■□□□□ 0.35
EFNB3Q15768 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFNB3Q15768 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFNB3Q15768 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFNB3Q15768 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
EFNB3Q15768 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms