Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 AC013268.1-206ENST00000638368 961 ntBASIC13.35□□□□□ -0.27
SYCNQ0VAF6 AC112229.1-201ENST00000639295 961 ntBASIC13.35□□□□□ -0.27
SYCNQ0VAF6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SYCNQ0VAF6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 KRT18P5-201ENST00000436075 1291 ntBASIC13.34□□□□□ -0.27
SYCNQ0VAF6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SYCNQ0VAF6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SYCNQ0VAF6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SYCNQ0VAF6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SYCNQ0VAF6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 RARRES2P6-201ENST00000567333 442 ntBASIC13.33□□□□□ -0.28
SYCNQ0VAF6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SYCNQ0VAF6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.32□□□□□ -0.28
SYCNQ0VAF6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SYCNQ0VAF6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms