Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YDR042CYDR042C 603 nt-0.82□□□□□ -2.54
VPS13Q07878 YEA4YEL004W 1029 nt-0.82□□□□□ -2.54
VPS13Q07878 RSM28YDR494W 1086 nt-0.83□□□□□ -2.54
VPS13Q07878 NUT1YGL151W 3399 nt-0.83□□□□□ -2.54
VPS13Q07878 NPR2YEL062W 1848 nt-0.83□□□□□ -2.54
VPS13Q07878 YGL217CYGL217C 342 nt-0.83□□□□□ -2.54
VPS13Q07878 YOR186C-AYOR186C-A 210 nt-0.83□□□□□ -2.54
VPS13Q07878 SDH2YLL041C 801 nt-0.84□□□□□ -2.54
VPS13Q07878 PGA1YNL158W 597 nt-0.84□□□□□ -2.54
VPS13Q07878 SLF1YDR515W 1344 nt-0.84□□□□□ -2.54
VPS13Q07878 YBR012CYBR012C 420 nt-0.84□□□□□ -2.54
VPS13Q07878 MUM2YBR057C 1101 nt-0.84□□□□□ -2.54
VPS13Q07878 FIG1YBR040W 897 nt-0.85□□□□□ -2.55
VPS13Q07878 YDR543CYDR543C 300 nt-0.85□□□□□ -2.55
VPS13Q07878 YAL068W-AYAL068W-A 255 nt-0.85□□□□□ -2.55
VPS13Q07878 HTB1YDR224C 396 nt-0.86□□□□□ -2.55
VPS13Q07878 YBR200W-AYBR200W-A 165 nt-0.86□□□□□ -2.55
VPS13Q07878 DAS1YJL149W 1992 nt-0.86□□□□□ -2.55
VPS13Q07878 AI5_ALPHAQ0070 1893 nt-0.87□□□□□ -2.55
VPS13Q07878 RPL40BYKR094C 387 nt-0.87□□□□□ -2.55
VPS13Q07878 HTB2YBL002W 396 nt-0.87□□□□□ -2.55
VPS13Q07878 ARK1YNL020C 1917 nt-0.88□□□□□ -2.55
VPS13Q07878 BIG1YHR101C 1008 nt-0.88□□□□□ -2.55
VPS13Q07878 HUB1YNR032C-A 222 nt-0.88□□□□□ -2.55
VPS13Q07878 QCR7YDR529C 384 nt-0.89□□□□□ -2.55
VPS13Q07878 TIM10YHR005C-A 282 nt-0.89□□□□□ -2.55
VPS13Q07878 PRM9YAR031W 897 nt-0.89□□□□□ -2.55
VPS13Q07878 GSP1YLR293C 660 nt-0.89□□□□□ -2.55
VPS13Q07878 MRPL49YJL096W 486 nt-0.89□□□□□ -2.55
VPS13Q07878 YPL073CYPL073C 486 nt-0.89□□□□□ -2.55
VPS13Q07878 SKI7YOR076C 2244 nt-0.9□□□□□ -2.55
VPS13Q07878 YPD1YDL235C 504 nt-0.9□□□□□ -2.55
VPS13Q07878 GLC7YER133W 939 nt-0.9□□□□□ -2.55
VPS13Q07878 ALG13YGL047W 609 nt-0.9□□□□□ -2.55
VPS13Q07878 YPR096CYPR096C 303 nt-0.9□□□□□ -2.55
VPS13Q07878 MMS4YBR098W 2076 nt-0.9□□□□□ -2.55
VPS13Q07878 SNF11YDR073W 510 nt-0.91□□□□□ -2.55
VPS13Q07878 YHR054CYHR054C 1065 nt-0.91□□□□□ -2.56
VPS13Q07878 ADF1YCL058W-A 342 nt-0.91□□□□□ -2.56
VPS13Q07878 ARP9YMR033W 1404 nt-0.92□□□□□ -2.56
VPS13Q07878 VAB2YEL005C 849 nt-0.92□□□□□ -2.56
VPS13Q07878 YJR071WYJR071W 369 nt-0.92□□□□□ -2.56
VPS13Q07878 YNR034W-AYNR034W-A 297 nt-0.92□□□□□ -2.56
VPS13Q07878 SFT1YKL006C-A 294 nt-0.92□□□□□ -2.56
VPS13Q07878 YKL156C-AYKL156C-A 117 nt-0.92□□□□□ -2.56
VPS13Q07878 SOV1YMR066W 2697 nt-0.92□□□□□ -2.56
VPS13Q07878 DAD1YDR016C 285 nt-0.93□□□□□ -2.56
VPS13Q07878 GPG1YGL121C 381 nt-0.93□□□□□ -2.56
VPS13Q07878 BFR2YDR299W 1605 nt-0.93□□□□□ -2.56
VPS13Q07878 GRX5YPL059W 453 nt-0.93□□□□□ -2.56
VPS13Q07878 LRS4YDR439W 1044 nt-0.94□□□□□ -2.56
VPS13Q07878 ISD11YER048W-A 285 nt-0.94□□□□□ -2.56
VPS13Q07878 YER038W-AYER038W-A 381 nt-0.94□□□□□ -2.56
VPS13Q07878 YOR199WYOR199W 330 nt-0.94□□□□□ -2.56
VPS13Q07878 YBR224WYBR224W 516 nt-0.94□□□□□ -2.56
VPS13Q07878 HNT1YDL125C 477 nt-0.95□□□□□ -2.56
VPS13Q07878 TIF11YMR260C 462 nt-0.96□□□□□ -2.56
VPS13Q07878 YGR115CYGR115C 780 nt-0.96□□□□□ -2.56
VPS13Q07878 MER1YNL210W 813 nt-0.96□□□□□ -2.56
VPS13Q07878 YGR011WYGR011W 327 nt-0.97□□□□□ -2.56
VPS13Q07878 CRG1YHR209W 876 nt-0.98□□□□□ -2.57
VPS13Q07878 SPC42YKL042W 1092 nt-0.98□□□□□ -2.57
VPS13Q07878 YDR286CYDR286C 345 nt-0.99□□□□□ -2.57
VPS13Q07878 JJJ2YJL162C 1752 nt-0.99□□□□□ -2.57
VPS13Q07878 YCR108CYCR108C 192 nt-0.99□□□□□ -2.57
VPS13Q07878 YDR340WYDR340W 303 nt-0.99□□□□□ -2.57
VPS13Q07878 NYV1YLR093C 762 nt-1□□□□□ -2.57
VPS13Q07878 YMR158W-BYMR158W-B 321 nt-1□□□□□ -2.57
VPS13Q07878 YLR252WYLR252W 306 nt-1□□□□□ -2.57
VPS13Q07878 RPL42AYNL162W 321 nt-1□□□□□ -2.57
VPS13Q07878 YDR509WYDR509W 348 nt-1□□□□□ -2.57
VPS13Q07878 YPL060C-AYPL060C-A 3315 nt-1.01□□□□□ -2.57
VPS13Q07878 YKL063CYKL063C 504 nt-1.01□□□□□ -2.57
VPS13Q07878 SRL4YPL033C 846 nt-1.01□□□□□ -2.57
VPS13Q07878 YJL120WYJL120W 324 nt-1.02□□□□□ -2.57
VPS13Q07878 LEE1YPL054W 906 nt-1.02□□□□□ -2.57
VPS13Q07878 SPO21YOL091W 1830 nt-1.02□□□□□ -2.57
VPS13Q07878 YJL114WYJL114W 681 nt-1.02□□□□□ -2.57
VPS13Q07878 DSE1YER124C 1722 nt-1.03□□□□□ -2.57
VPS13Q07878 YCR043CYCR043C 384 nt-1.03□□□□□ -2.57
VPS13Q07878 DPB11YJL090C 2295 nt-1.03□□□□□ -2.57
VPS13Q07878 YFR056CYFR056C 369 nt-1.04□□□□□ -2.58
VPS13Q07878 CIN2YPL241C 807 nt-1.04□□□□□ -2.58
VPS13Q07878 YIR018C-AYIR018C-A 138 nt-1.04□□□□□ -2.58
VPS13Q07878 YKU70YMR284W 1809 nt-1.06□□□□□ -2.58
VPS13Q07878 MRPS8YMR158W 468 nt-1.06□□□□□ -2.58
VPS13Q07878 YNL067W-BYNL067W-B 141 nt-1.06□□□□□ -2.58
VPS13Q07878 IPP1YBR011C 864 nt-1.06□□□□□ -2.58
VPS13Q07878 OCA6YDR067C 675 nt-1.07□□□□□ -2.58
VPS13Q07878 YPL205CYPL205C 345 nt-1.07□□□□□ -2.58
VPS13Q07878 RPM2YML091C 3609 nt-1.07□□□□□ -2.58
VPS13Q07878 YCR102W-AYCR102W-A 198 nt-1.07□□□□□ -2.58
VPS13Q07878 snR11snR11 258 nt-1.07□□□□□ -2.58
VPS13Q07878 ECM25YJL201W 1800 nt-1.08□□□□□ -2.58
VPS13Q07878 snR191snR191 274 nt-1.09□□□□□ -2.58
VPS13Q07878 YOR343W-AYOR343W-A 1317 nt-1.09□□□□□ -2.58
VPS13Q07878 NIP1YMR309C 2439 nt-1.09□□□□□ -2.58
VPS13Q07878 AHC2YCR082W 387 nt-1.09□□□□□ -2.58
VPS13Q07878 BRX1YOL077C 876 nt-1.09□□□□□ -2.58
VPS13Q07878 PMP1YCR024C-A 123 nt-1.1□□□□□ -2.59
Retrieved 100 of 7,029 protein–RNA pairs in 52 ms