Protein–RNA interactions for Protein: Q05789

ATG38, Autophagy-related protein 38, yeastyeast

Known RBP Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG38Q05789 AIM44YPL158C 2277 nt0.69□□□□□ -2.3
ATG38Q05789 CMC4YMR194C-B 222 nt0.69□□□□□ -2.3
ATG38Q05789 YDL206WYDL206W 2289 nt0.69□□□□□ -2.3
ATG38Q05789 NHP2YDL208W 471 nt0.68□□□□□ -2.3
ATG38Q05789 YDR115WYDR115W 318 nt0.68□□□□□ -2.3
ATG38Q05789 ZIP1YDR285W 2628 nt0.68□□□□□ -2.3
ATG38Q05789 YDR521WYDR521W 336 nt0.68□□□□□ -2.3
ATG38Q05789 SET3YKR029C 2256 nt0.67□□□□□ -2.3
ATG38Q05789 MXR1YER042W 555 nt0.67□□□□□ -2.3
ATG38Q05789 YIL142C-AYIL142C-A 333 nt0.67□□□□□ -2.3
ATG38Q05789 TMA22YJR014W 597 nt0.67□□□□□ -2.3
ATG38Q05789 POL32YJR043C 1053 nt0.67□□□□□ -2.3
ATG38Q05789 ATP20YPR020W 348 nt0.67□□□□□ -2.3
ATG38Q05789 BUD26YDR241W 288 nt0.66□□□□□ -2.3
ATG38Q05789 SMB1YER029C 591 nt0.66□□□□□ -2.3
ATG38Q05789 YOR199WYOR199W 330 nt0.66□□□□□ -2.3
ATG38Q05789 SPR2YOR214C 711 nt0.66□□□□□ -2.3
ATG38Q05789 SEC1YDR164C 2175 nt0.66□□□□□ -2.3
ATG38Q05789 PIG1YLR273C 1947 nt0.66□□□□□ -2.3
ATG38Q05789 TDA2YER071C 381 nt0.65□□□□□ -2.31
ATG38Q05789 ACF4YJR083C 930 nt0.65□□□□□ -2.31
ATG38Q05789 YOP1YPR028W 543 nt0.65□□□□□ -2.31
ATG38Q05789 SAG1YJR004C 1953 nt0.65□□□□□ -2.31
ATG38Q05789 tT(AGU)BtT(AGU)B 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)CtT(AGU)C 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)DtT(AGU)D 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)HtT(AGU)H 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)I1tT(AGU)I1 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)I2tT(AGU)I2 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)JtT(AGU)J 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)N1tT(AGU)N1 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)N2tT(AGU)N2 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)O1tT(AGU)O1 73 nt0.64□□□□□ -2.31
ATG38Q05789 tT(AGU)O2tT(AGU)O2 73 nt0.64□□□□□ -2.31
ATG38Q05789 YPR147CYPR147C 915 nt0.64□□□□□ -2.31
ATG38Q05789 VPS52YDR484W 1926 nt0.64□□□□□ -2.31
ATG38Q05789 GPM2YDL021W 936 nt0.63□□□□□ -2.31
ATG38Q05789 YHR028W-AYHR028W-A 321 nt0.63□□□□□ -2.31
ATG38Q05789 BMT5YIL096C 1011 nt0.63□□□□□ -2.31
ATG38Q05789 SLM6YBR266C 453 nt0.63□□□□□ -2.31
ATG38Q05789 YDL196WYDL196W 330 nt0.62□□□□□ -2.31
ATG38Q05789 YDR003W-AYDR003W-A 123 nt0.62□□□□□ -2.31
ATG38Q05789 YOL106WYOL106W 354 nt0.62□□□□□ -2.31
ATG38Q05789 RKR1YMR247C 4689 nt0.61□□□□□ -2.31
ATG38Q05789 YDL152WYDL152W 366 nt0.61□□□□□ -2.31
ATG38Q05789 CUP1-1YHR053C 186 nt0.61□□□□□ -2.31
ATG38Q05789 CUP1-2YHR055C 186 nt0.61□□□□□ -2.31
ATG38Q05789 YML009C-AYML009C-A 327 nt0.61□□□□□ -2.31
ATG38Q05789 SWI5YDR146C 2130 nt0.61□□□□□ -2.31
ATG38Q05789 SWF1YDR126W 1011 nt0.6□□□□□ -2.31
ATG38Q05789 RPL38YLR325C 237 nt0.6□□□□□ -2.31
ATG38Q05789 TFB6YOR352W 1032 nt0.6□□□□□ -2.31
ATG38Q05789 ALY2YJL084C 3141 nt0.6□□□□□ -2.31
ATG38Q05789 UTP20YBL004W 7482 nt0.6□□□□□ -2.31
ATG38Q05789 PDE2YOR360C 1581 nt0.59□□□□□ -2.31
ATG38Q05789 YML002WYML002W 2214 nt0.59□□□□□ -2.31
ATG38Q05789 RUF22RUF22 515 nt0.59□□□□□ -2.31
ATG38Q05789 STO1YMR125W 2586 nt0.59□□□□□ -2.32
ATG38Q05789 YMR160WYMR160W 2451 nt0.58□□□□□ -2.32
ATG38Q05789 tT(UGU)Q1tT(UGU)Q1 76 nt0.58□□□□□ -2.32
ATG38Q05789 YOR029WYOR029W 336 nt0.58□□□□□ -2.32
ATG38Q05789 SRP14YDL092W 441 nt0.57□□□□□ -2.32
ATG38Q05789 snR79snR79 84 nt0.57□□□□□ -2.32
ATG38Q05789 YDR509WYDR509W 348 nt0.57□□□□□ -2.32
ATG38Q05789 YJR140W-AYJR140W-A 150 nt0.57□□□□□ -2.32
ATG38Q05789 RRI2YOL117W 1938 nt0.57□□□□□ -2.32
ATG38Q05789 FIG4YNL325C 2640 nt0.57□□□□□ -2.32
ATG38Q05789 YLL007CYLL007C 1998 nt0.56□□□□□ -2.32
ATG38Q05789 MKT1YNL085W 2493 nt0.56□□□□□ -2.32
ATG38Q05789 YMR175W-AYMR175W-A 195 nt0.56□□□□□ -2.32
ATG38Q05789 YDR114CYDR114C 303 nt0.55□□□□□ -2.32
ATG38Q05789 YER023C-AYER023C-A 213 nt0.55□□□□□ -2.32
ATG38Q05789 YHR054CYHR054C 1065 nt0.55□□□□□ -2.32
ATG38Q05789 YMR304C-AYMR304C-A 351 nt0.55□□□□□ -2.32
ATG38Q05789 YNL150WYNL150W 408 nt0.55□□□□□ -2.32
ATG38Q05789 SCW11YGL028C 1629 nt0.55□□□□□ -2.32
ATG38Q05789 UTP10YJL109C 5310 nt0.54□□□□□ -2.32
ATG38Q05789 OCA6YDR067C 675 nt0.54□□□□□ -2.32
ATG38Q05789 ALG13YGL047W 609 nt0.54□□□□□ -2.32
ATG38Q05789 ECM12YHR021W-A 456 nt0.54□□□□□ -2.32
ATG38Q05789 COX7YMR256C 183 nt0.54□□□□□ -2.32
ATG38Q05789 YBR032WYBR032W 303 nt0.54□□□□□ -2.32
ATG38Q05789 YBL068W-AYBL068W-A 237 nt0.53□□□□□ -2.32
ATG38Q05789 PXA2YKL188C 2562 nt0.53□□□□□ -2.32
ATG38Q05789 MMS4YBR098W 2076 nt0.53□□□□□ -2.32
ATG38Q05789 LIN1YHR156C 1023 nt0.52□□□□□ -2.33
ATG38Q05789 IES4YOR189W 351 nt0.52□□□□□ -2.33
ATG38Q05789 HNT1YDL125C 477 nt0.51□□□□□ -2.33
ATG38Q05789 AI5_ALPHAQ0070 1893 nt0.51□□□□□ -2.33
ATG38Q05789 STF2YGR008C 255 nt0.51□□□□□ -2.33
ATG38Q05789 YHR063W-AYHR063W-A 336 nt0.51□□□□□ -2.33
ATG38Q05789 OST1YJL002C 1431 nt0.51□□□□□ -2.33
ATG38Q05789 HIT1YJR055W 495 nt0.51□□□□□ -2.33
ATG38Q05789 DBP6YNR038W 1890 nt0.51□□□□□ -2.33
ATG38Q05789 YEL018C-AYEL018C-A 534 nt0.5□□□□□ -2.33
ATG38Q05789 TIM10YHR005C-A 282 nt0.5□□□□□ -2.33
ATG38Q05789 CMC1YKL137W 336 nt0.5□□□□□ -2.33
ATG38Q05789 YOR072W-AYOR072W-A 249 nt0.5□□□□□ -2.33
ATG38Q05789 YPL197CYPL197C 414 nt0.5□□□□□ -2.33
ATG38Q05789 SPO23YBR250W 1572 nt0.49□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 42.5 ms