Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 CDC10YCR002C 969 nt-0.77□□□□□ -2.53
RKR1Q04781 YHR212CYHR212C 336 nt-0.77□□□□□ -2.53
RKR1Q04781 YAR060CYAR060C 336 nt-0.77□□□□□ -2.53
RKR1Q04781 PTP2YOR208W 2253 nt-0.77□□□□□ -2.53
RKR1Q04781 HYM1YKL189W 1200 nt-0.78□□□□□ -2.53
RKR1Q04781 snR84snR84 550 nt-0.79□□□□□ -2.54
RKR1Q04781 YOL035CYOL035C 303 nt-0.79□□□□□ -2.54
RKR1Q04781 BIG1YHR101C 1008 nt-0.79□□□□□ -2.54
RKR1Q04781 YDR034C-CYDR034C-C 1317 nt-0.79□□□□□ -2.54
RKR1Q04781 SLD5YDR489W 885 nt-0.8□□□□□ -2.54
RKR1Q04781 SMD1YGR074W 441 nt-0.8□□□□□ -2.54
RKR1Q04781 YBR223W-AYBR223W-A 120 nt-0.8□□□□□ -2.54
RKR1Q04781 ISD11YER048W-A 285 nt-0.81□□□□□ -2.54
RKR1Q04781 YOP1YPR028W 543 nt-0.81□□□□□ -2.54
RKR1Q04781 MCM10YIL150C 1716 nt-0.81□□□□□ -2.54
RKR1Q04781 YDR320W-BYDR320W-B 138 nt-0.82□□□□□ -2.54
RKR1Q04781 BFR2YDR299W 1605 nt-0.82□□□□□ -2.54
RKR1Q04781 YDR509WYDR509W 348 nt-0.83□□□□□ -2.54
RKR1Q04781 VMA21YGR105W 234 nt-0.83□□□□□ -2.54
RKR1Q04781 YAL064WYAL064W 285 nt-0.83□□□□□ -2.54
RKR1Q04781 YLR101CYLR101C 396 nt-0.83□□□□□ -2.54
RKR1Q04781 YOR203WYOR203W 354 nt-0.83□□□□□ -2.54
RKR1Q04781 ISA2YPR067W 558 nt-0.83□□□□□ -2.54
RKR1Q04781 snR36snR36 182 nt-0.83□□□□□ -2.54
RKR1Q04781 PET111YMR257C 2403 nt-0.83□□□□□ -2.54
RKR1Q04781 VPS52YDR484W 1926 nt-0.83□□□□□ -2.54
RKR1Q04781 YBR221W-AYBR221W-A 105 nt-0.83□□□□□ -2.54
RKR1Q04781 CIN2YPL241C 807 nt-0.84□□□□□ -2.54
RKR1Q04781 RCO1YMR075W 2055 nt-0.85□□□□□ -2.54
RKR1Q04781 YEL073CYEL073C 324 nt-0.86□□□□□ -2.55
RKR1Q04781 NPR2YEL062W 1848 nt-0.86□□□□□ -2.55
RKR1Q04781 RAD10YML095C 633 nt-0.87□□□□□ -2.55
RKR1Q04781 YGR064WYGR064W 369 nt-0.87□□□□□ -2.55
RKR1Q04781 YJR011CYJR011C 786 nt-0.87□□□□□ -2.55
RKR1Q04781 YOR169CYOR169C 465 nt-0.87□□□□□ -2.55
RKR1Q04781 CLG1YGL215W 1359 nt-0.89□□□□□ -2.55
RKR1Q04781 YDR114CYDR114C 303 nt-0.89□□□□□ -2.55
RKR1Q04781 YGL138CYGL138C 1038 nt-0.89□□□□□ -2.55
RKR1Q04781 YOR282WYOR282W 321 nt-0.89□□□□□ -2.55
RKR1Q04781 snR8snR8 190 nt-0.9□□□□□ -2.55
RKR1Q04781 ARL3YPL051W 597 nt-0.91□□□□□ -2.55
RKR1Q04781 OCA6YDR067C 675 nt-0.91□□□□□ -2.56
RKR1Q04781 DXO1YDR370C 1329 nt-0.92□□□□□ -2.56
RKR1Q04781 DSE1YER124C 1722 nt-0.92□□□□□ -2.56
RKR1Q04781 COG7YGL005C 840 nt-0.92□□□□□ -2.56
RKR1Q04781 YBR201C-AYBR201C-A 204 nt-0.92□□□□□ -2.56
RKR1Q04781 YFR010W-AYFR010W-A 189 nt-0.94□□□□□ -2.56
RKR1Q04781 YJR141WYJR141W 1044 nt-0.94□□□□□ -2.56
RKR1Q04781 STO1YMR125W 2586 nt-0.94□□□□□ -2.56
RKR1Q04781 YFL002W-BYFL002W-B 1317 nt-0.94□□□□□ -2.56
RKR1Q04781 YGR161W-AYGR161W-A 1317 nt-0.94□□□□□ -2.56
RKR1Q04781 YLR410W-AYLR410W-A 1317 nt-0.94□□□□□ -2.56
RKR1Q04781 YCL020WYCL020W 1317 nt-0.94□□□□□ -2.56
RKR1Q04781 SPO77YLR341W 1434 nt-0.95□□□□□ -2.56
RKR1Q04781 SOV1YMR066W 2697 nt-0.95□□□□□ -2.56
RKR1Q04781 YNL143CYNL143C 393 nt-0.96□□□□□ -2.56
RKR1Q04781 BFR1YOR198C 1413 nt-0.96□□□□□ -2.56
RKR1Q04781 NOP12YOL041C 1380 nt-0.97□□□□□ -2.56
RKR1Q04781 MMS2YGL087C 414 nt-0.98□□□□□ -2.57
RKR1Q04781 YBL068W-AYBL068W-A 237 nt-0.98□□□□□ -2.57
RKR1Q04781 snR161snR161 161 nt-0.99□□□□□ -2.57
RKR1Q04781 RPC25YKL144C 639 nt-1□□□□□ -2.57
RKR1Q04781 YOR105WYOR105W 327 nt-1□□□□□ -2.57
RKR1Q04781 YCR043CYCR043C 384 nt-1□□□□□ -2.57
RKR1Q04781 TAN1YGL232W 870 nt-1□□□□□ -2.57
RKR1Q04781 snR33snR33 183 nt-1□□□□□ -2.57
RKR1Q04781 DPB11YJL090C 2295 nt-1.01□□□□□ -2.57
RKR1Q04781 YDL025W-AYDL025W-A 105 nt-1.01□□□□□ -2.57
RKR1Q04781 TCA17YEL048C 459 nt-1.01□□□□□ -2.57
RKR1Q04781 RRT16YNL105W 429 nt-1.01□□□□□ -2.57
RKR1Q04781 YBR224WYBR224W 516 nt-1.01□□□□□ -2.57
RKR1Q04781 SPO74YGL170C 1242 nt-1.03□□□□□ -2.57
RKR1Q04781 YOR020W-AYOR020W-A 273 nt-1.03□□□□□ -2.57
RKR1Q04781 YOR186C-AYOR186C-A 210 nt-1.03□□□□□ -2.57
RKR1Q04781 ECM11YDR446W 909 nt-1.04□□□□□ -2.58
RKR1Q04781 HOT13YKL084W 351 nt-1.04□□□□□ -2.58
RKR1Q04781 COG6YNL041C 2520 nt-1.04□□□□□ -2.58
RKR1Q04781 YNL144W-AYNL144W-A 84 nt-1.04□□□□□ -2.58
RKR1Q04781 RRG1YDR065W 1098 nt-1.05□□□□□ -2.58
RKR1Q04781 RMD5YDR255C 1266 nt-1.05□□□□□ -2.58
RKR1Q04781 YMR173W-AYMR173W-A 1185 nt-1.05□□□□□ -2.58
RKR1Q04781 DDR48YMR173W 1293 nt-1.05□□□□□ -2.58
RKR1Q04781 RPS7BYNL096C 573 nt-1.06□□□□□ -2.58
RKR1Q04781 IZH4YOL101C 939 nt-1.06□□□□□ -2.58
RKR1Q04781 UPF3YGR072W 1164 nt-1.07□□□□□ -2.58
RKR1Q04781 YGR114CYGR114C 390 nt-1.07□□□□□ -2.58
RKR1Q04781 PMP1YCR024C-A 123 nt-1.08□□□□□ -2.58
RKR1Q04781 TMA20YER007C-A 546 nt-1.08□□□□□ -2.58
RKR1Q04781 MIX23YBL107C 591 nt-1.08□□□□□ -2.58
RKR1Q04781 YGR042WYGR042W 816 nt-1.09□□□□□ -2.58
RKR1Q04781 NFU1YKL040C 771 nt-1.09□□□□□ -2.58
RKR1Q04781 PFK27YOL136C 1194 nt-1.1□□□□□ -2.59
RKR1Q04781 YBL100W-AYBL100W-A 1317 nt-1.11□□□□□ -2.59
RKR1Q04781 ECM25YJL201W 1800 nt-1.11□□□□□ -2.59
RKR1Q04781 ARP9YMR033W 1404 nt-1.12□□□□□ -2.59
RKR1Q04781 CGI121YML036W 546 nt-1.13□□□□□ -2.59
RKR1Q04781 MUM2YBR057C 1101 nt-1.13□□□□□ -2.59
RKR1Q04781 YNL150WYNL150W 408 nt-1.13□□□□□ -2.59
RKR1Q04781 TFB6YOR352W 1032 nt-1.14□□□□□ -2.59
RKR1Q04781 VPS28YPL065W 729 nt-1.15□□□□□ -2.59
Retrieved 100 of 7,029 protein–RNA pairs in 92.2 ms