Protein–RNA interactions for Protein: Q04602

VBA4, Vacuolar basic amino acid transporter 4, yeastyeast

Known RBP Predictions only

Length 768 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA4Q04602 RAD61YDR014W 1944 nt2.37□□□□□ -2.03
VBA4Q04602 YNL114CYNL114C 372 nt2.37□□□□□ -2.03
VBA4Q04602 YBL083CYBL083C 426 nt2.37□□□□□ -2.03
VBA4Q04602 YOR394C-AYOR394C-A 168 nt2.37□□□□□ -2.03
VBA4Q04602 VPH1YOR270C 2523 nt2.37□□□□□ -2.03
VBA4Q04602 IRR1YIL026C 3453 nt2.37□□□□□ -2.03
VBA4Q04602 GRR1YJR090C 3456 nt2.36□□□□□ -2.03
VBA4Q04602 RSE1YML049C 4086 nt2.36□□□□□ -2.03
VBA4Q04602 PXA2YKL188C 2562 nt2.36□□□□□ -2.03
VBA4Q04602 COG8YML071C 1824 nt2.36□□□□□ -2.03
VBA4Q04602 YPR097WYPR097W 3222 nt2.36□□□□□ -2.03
VBA4Q04602 YDR286CYDR286C 345 nt2.36□□□□□ -2.03
VBA4Q04602 PCC1YKR095W-A 267 nt2.36□□□□□ -2.03
VBA4Q04602 YMR141W-AYMR141W-A 225 nt2.36□□□□□ -2.03
VBA4Q04602 YPR063CYPR063C 423 nt2.36□□□□□ -2.03
VBA4Q04602 RPO41YFL036W 4056 nt2.36□□□□□ -2.03
VBA4Q04602 BNR1YIL159W 4128 nt2.36□□□□□ -2.03
VBA4Q04602 SEC26YDR238C 2922 nt2.36□□□□□ -2.03
VBA4Q04602 SNF5YBR289W 2718 nt2.36□□□□□ -2.03
VBA4Q04602 MNL2YLR057W 2550 nt2.36□□□□□ -2.03
VBA4Q04602 SET2YJL168C 2202 nt2.36□□□□□ -2.03
VBA4Q04602 EFR3YMR212C 2349 nt2.35□□□□□ -2.03
VBA4Q04602 YHL042WYHL042W 453 nt2.35□□□□□ -2.03
VBA4Q04602 YLR146W-AYLR146W-A 189 nt2.35□□□□□ -2.03
VBA4Q04602 YLR255CYLR255C 354 nt2.35□□□□□ -2.03
VBA4Q04602 MVP1YMR004W 1536 nt2.35□□□□□ -2.03
VBA4Q04602 TRA1YHR099W 11235 nt2.35□□□□□ -2.03
VBA4Q04602 MCD1YDL003W 1701 nt2.34□□□□□ -2.03
VBA4Q04602 YEF3YLR249W 3135 nt2.34□□□□□ -2.03
VBA4Q04602 tM(CAU)Q1tM(CAU)Q1 76 nt2.34□□□□□ -2.03
VBA4Q04602 RPL42BYHR141C 321 nt2.34□□□□□ -2.03
VBA4Q04602 RPL42AYNL162W 321 nt2.34□□□□□ -2.03
VBA4Q04602 YOR008C-AYOR008C-A 225 nt2.34□□□□□ -2.03
VBA4Q04602 YDR426CYDR426C 378 nt2.33□□□□□ -2.04
VBA4Q04602 PAU8YAL068C 363 nt2.33□□□□□ -2.04
VBA4Q04602 PAU20YOL161C 363 nt2.33□□□□□ -2.04
VBA4Q04602 snR49snR49 165 nt2.33□□□□□ -2.04
VBA4Q04602 MDM20YOL076W 2391 nt2.33□□□□□ -2.04
VBA4Q04602 ARP7YPR034W 1434 nt2.33□□□□□ -2.04
VBA4Q04602 YPR002C-AYPR002C-A 198 nt2.32□□□□□ -2.04
VBA4Q04602 RPH1YER169W 2391 nt2.32□□□□□ -2.04
VBA4Q04602 MET18YIL128W 3099 nt2.32□□□□□ -2.04
VBA4Q04602 UBR1YGR184C 5853 nt2.32□□□□□ -2.04
VBA4Q04602 UBP15YMR304W 3693 nt2.31□□□□□ -2.04
VBA4Q04602 SLM1YIL105C 2061 nt2.31□□□□□ -2.04
VBA4Q04602 YCR043CYCR043C 384 nt2.31□□□□□ -2.04
VBA4Q04602 tW(CCA)G1tW(CCA)G1 72 nt2.31□□□□□ -2.04
VBA4Q04602 tW(CCA)G2tW(CCA)G2 72 nt2.31□□□□□ -2.04
VBA4Q04602 tW(CCA)JtW(CCA)J 72 nt2.31□□□□□ -2.04
VBA4Q04602 tW(CCA)KtW(CCA)K 72 nt2.31□□□□□ -2.04
VBA4Q04602 tW(CCA)MtW(CCA)M 72 nt2.31□□□□□ -2.04
VBA4Q04602 tW(CCA)PtW(CCA)P 72 nt2.31□□□□□ -2.04
VBA4Q04602 TRX1YLR043C 312 nt2.31□□□□□ -2.04
VBA4Q04602 YLR154W-AYLR154W-A 186 nt2.31□□□□□ -2.04
VBA4Q04602 YMR194C-AYMR194C-A 225 nt2.31□□□□□ -2.04
VBA4Q04602 TOR1YJR066W 7413 nt2.31□□□□□ -2.04
VBA4Q04602 FKS3YMR306W 5358 nt2.31□□□□□ -2.04
VBA4Q04602 PTP3YER075C 2787 nt2.3□□□□□ -2.04
VBA4Q04602 SDH2YLL041C 801 nt2.3□□□□□ -2.04
VBA4Q04602 YLL032CYLL032C 2478 nt2.3□□□□□ -2.04
VBA4Q04602 ZRG8YER033C 3231 nt2.3□□□□□ -2.04
VBA4Q04602 YGR250CYGR250C 2346 nt2.29□□□□□ -2.04
VBA4Q04602 SCW11YGL028C 1629 nt2.29□□□□□ -2.04
VBA4Q04602 YKL183C-AYKL183C-A 213 nt2.29□□□□□ -2.04
VBA4Q04602 YBR064WYBR064W 429 nt2.29□□□□□ -2.04
VBA4Q04602 CFT2YLR115W 2580 nt2.29□□□□□ -2.04
VBA4Q04602 HCS1YKL017C 2052 nt2.29□□□□□ -2.04
VBA4Q04602 SSQ1YLR369W 1974 nt2.29□□□□□ -2.04
VBA4Q04602 PDR1YGL013C 3207 nt2.28□□□□□ -2.04
VBA4Q04602 TUS1YLR425W 3924 nt2.28□□□□□ -2.04
VBA4Q04602 YCR018C-AYCR018C-A 255 nt2.28□□□□□ -2.04
VBA4Q04602 snR60snR60 104 nt2.28□□□□□ -2.04
VBA4Q04602 snR70snR70 164 nt2.28□□□□□ -2.04
VBA4Q04602 CDC36YDL165W 576 nt2.28□□□□□ -2.04
VBA4Q04602 YGL041CYGL041C 204 nt2.28□□□□□ -2.04
VBA4Q04602 BLI1YKL061W 342 nt2.28□□□□□ -2.04
VBA4Q04602 RPS17AYML024W 411 nt2.28□□□□□ -2.04
VBA4Q04602 ABF2YMR072W 552 nt2.28□□□□□ -2.04
VBA4Q04602 MNE1YOR350C 1992 nt2.28□□□□□ -2.04
VBA4Q04602 BUB1YGR188C 3066 nt2.28□□□□□ -2.05
VBA4Q04602 MLH1YMR167W 2310 nt2.28□□□□□ -2.05
VBA4Q04602 PDR3YBL005W 2931 nt2.28□□□□□ -2.05
VBA4Q04602 snR43snR43 209 nt2.27□□□□□ -2.05
VBA4Q04602 VPS8YAL002W 3825 nt2.27□□□□□ -2.05
VBA4Q04602 SWI6YLR182W 2412 nt2.27□□□□□ -2.05
VBA4Q04602 SPF1YEL031W 3648 nt2.27□□□□□ -2.05
VBA4Q04602 YBL005W-BYBL005W-B 5268 nt2.26□□□□□ -2.05
VBA4Q04602 MUK1YPL070W 1839 nt2.26□□□□□ -2.05
VBA4Q04602 INP2YMR163C 2118 nt2.26□□□□□ -2.05
VBA4Q04602 YPP1YGR198W 2454 nt2.26□□□□□ -2.05
VBA4Q04602 YHR032W-AYHR032W-A 180 nt2.26□□□□□ -2.05
VBA4Q04602 PAU18YLL064C 363 nt2.26□□□□□ -2.05
VBA4Q04602 YNL337WYNL337W 255 nt2.26□□□□□ -2.05
VBA4Q04602 PAU6YNR076W 363 nt2.26□□□□□ -2.05
VBA4Q04602 ARP8YOR141C 2646 nt2.26□□□□□ -2.05
VBA4Q04602 PLC1YPL268W 2610 nt2.26□□□□□ -2.05
VBA4Q04602 SWI5YDR146C 2130 nt2.26□□□□□ -2.05
VBA4Q04602 SIR4YDR227W 4077 nt2.25□□□□□ -2.05
VBA4Q04602 RFX1YLR176C 2436 nt2.25□□□□□ -2.05
VBA4Q04602 KTI11YBL071W-A 249 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms