Protein–RNA interactions for Protein: Q03790

NUP53, Nucleoporin NUP53, yeastyeast

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP53Q03790 IPT1YDR072C 1584 nt2.19□□□□□ -2.06
NUP53Q03790 PFF1YBR074W 2931 nt2.19□□□□□ -2.06
NUP53Q03790 SNU114YKL173W 3027 nt2.19□□□□□ -2.06
NUP53Q03790 YNL010WYNL010W 726 nt2.19□□□□□ -2.06
NUP53Q03790 LSM7YNL147W 348 nt2.19□□□□□ -2.06
NUP53Q03790 YOR015WYOR015W 360 nt2.19□□□□□ -2.06
NUP53Q03790 DIS3YOL021C 3006 nt2.19□□□□□ -2.06
NUP53Q03790 PDR1YGL013C 3207 nt2.19□□□□□ -2.06
NUP53Q03790 VPS16YPL045W 2397 nt2.18□□□□□ -2.06
NUP53Q03790 SIR3YLR442C 2937 nt2.18□□□□□ -2.06
NUP53Q03790 RGA2YDR379W 3030 nt2.18□□□□□ -2.06
NUP53Q03790 EDS1YBR033W 2760 nt2.18□□□□□ -2.06
NUP53Q03790 NCL1YBL024W 2055 nt2.18□□□□□ -2.06
NUP53Q03790 RBK1YCR036W 1002 nt2.18□□□□□ -2.06
NUP53Q03790 PRE4YFR050C 801 nt2.18□□□□□ -2.06
NUP53Q03790 YLR053CYLR053C 327 nt2.18□□□□□ -2.06
NUP53Q03790 YMR141W-AYMR141W-A 225 nt2.18□□□□□ -2.06
NUP53Q03790 YMR172C-AYMR172C-A 384 nt2.18□□□□□ -2.06
NUP53Q03790 YOR170WYOR170W 306 nt2.18□□□□□ -2.06
NUP53Q03790 MRD1YPR112C 2664 nt2.18□□□□□ -2.06
NUP53Q03790 APL5YPL195W 2799 nt2.18□□□□□ -2.06
NUP53Q03790 HDA3YPR179C 1968 nt2.18□□□□□ -2.06
NUP53Q03790 SLN1YIL147C 3663 nt2.18□□□□□ -2.06
NUP53Q03790 TMN3YER113C 2121 nt2.17□□□□□ -2.06
NUP53Q03790 GIN4YDR507C 3429 nt2.17□□□□□ -2.06
NUP53Q03790 VTC1YER072W 390 nt2.17□□□□□ -2.06
NUP53Q03790 YGL024WYGL024W 336 nt2.17□□□□□ -2.06
NUP53Q03790 YIL059CYIL059C 366 nt2.17□□□□□ -2.06
NUP53Q03790 CYB5YNL111C 363 nt2.17□□□□□ -2.06
NUP53Q03790 YNL170WYNL170W 396 nt2.17□□□□□ -2.06
NUP53Q03790 YPR063CYPR063C 423 nt2.17□□□□□ -2.06
NUP53Q03790 YBR277CYBR277C 402 nt2.17□□□□□ -2.06
NUP53Q03790 KRE33YNL132W 3171 nt2.17□□□□□ -2.06
NUP53Q03790 INP53YOR109W 3324 nt2.17□□□□□ -2.06
NUP53Q03790 NPC2YDL046W 522 nt2.16□□□□□ -2.06
NUP53Q03790 tF(GAA)QtF(GAA)Q 75 nt2.16□□□□□ -2.06
NUP53Q03790 Q0143Q0143 153 nt2.16□□□□□ -2.06
NUP53Q03790 YLR154W-EYLR154W-E 204 nt2.16□□□□□ -2.06
NUP53Q03790 HHT1YBR010W 411 nt2.16□□□□□ -2.06
NUP53Q03790 CBF2YGR140W 2871 nt2.16□□□□□ -2.06
NUP53Q03790 STH1YIL126W 4080 nt2.16□□□□□ -2.06
NUP53Q03790 SAK1YER129W 3429 nt2.15□□□□□ -2.06
NUP53Q03790 UBP1YDL122W 2430 nt2.15□□□□□ -2.07
NUP53Q03790 YGL052WYGL052W 306 nt2.15□□□□□ -2.07
NUP53Q03790 YIL156W-BYIL156W-B 222 nt2.15□□□□□ -2.07
NUP53Q03790 LCL2YLR104W 396 nt2.15□□□□□ -2.07
NUP53Q03790 YMR321CYMR321C 318 nt2.15□□□□□ -2.07
NUP53Q03790 YOR055WYOR055W 435 nt2.15□□□□□ -2.07
NUP53Q03790 TRS130YMR218C 3309 nt2.15□□□□□ -2.07
NUP53Q03790 DOT6YER088C 2013 nt2.15□□□□□ -2.07
NUP53Q03790 MPH1YIR002C 2982 nt2.14□□□□□ -2.07
NUP53Q03790 SCW11YGL028C 1629 nt2.14□□□□□ -2.07
NUP53Q03790 YDL025W-AYDL025W-A 105 nt2.14□□□□□ -2.07
NUP53Q03790 YJL135WYJL135W 318 nt2.14□□□□□ -2.07
NUP53Q03790 KTI11YBL071W-A 249 nt2.14□□□□□ -2.07
NUP53Q03790 PHO2YDL106C 1680 nt2.14□□□□□ -2.07
NUP53Q03790 YGR250CYGR250C 2346 nt2.14□□□□□ -2.07
NUP53Q03790 UBR1YGR184C 5853 nt2.14□□□□□ -2.07
NUP53Q03790 AI5_ALPHAQ0070 1893 nt2.14□□□□□ -2.07
NUP53Q03790 PRP39YML046W 1890 nt2.14□□□□□ -2.07
NUP53Q03790 RAV1YJR033C 4074 nt2.13□□□□□ -2.07
NUP53Q03790 BNI1YNL271C 5862 nt2.13□□□□□ -2.07
NUP53Q03790 YEL043WYEL043W 2871 nt2.13□□□□□ -2.07
NUP53Q03790 SSS1YDR086C 243 nt2.13□□□□□ -2.07
NUP53Q03790 YGL014C-AYGL014C-A 162 nt2.13□□□□□ -2.07
NUP53Q03790 INA22YIR024C 651 nt2.13□□□□□ -2.07
NUP53Q03790 RPS27AYKL156W 249 nt2.13□□□□□ -2.07
NUP53Q03790 GRX8YLR364W 330 nt2.13□□□□□ -2.07
NUP53Q03790 YMR194C-AYMR194C-A 225 nt2.13□□□□□ -2.07
NUP53Q03790 BFA1YJR053W 1725 nt2.13□□□□□ -2.07
NUP53Q03790 YEF3YLR249W 3135 nt2.13□□□□□ -2.07
NUP53Q03790 GUP1YGL084C 1683 nt2.12□□□□□ -2.07
NUP53Q03790 PAN3YKL025C 2040 nt2.12□□□□□ -2.07
NUP53Q03790 GIS1YDR096W 2685 nt2.12□□□□□ -2.07
NUP53Q03790 YLR120W-AYLR120W-A 102 nt2.12□□□□□ -2.07
NUP53Q03790 PHO91YNR013C 2685 nt2.12□□□□□ -2.07
NUP53Q03790 UBP11YKR098C 2154 nt2.12□□□□□ -2.07
NUP53Q03790 RTT10YPL183C 3042 nt2.12□□□□□ -2.07
NUP53Q03790 NUP100YKL068W 2880 nt2.11□□□□□ -2.07
NUP53Q03790 YDR426CYDR426C 378 nt2.11□□□□□ -2.07
NUP53Q03790 ATP7YKL016C 525 nt2.11□□□□□ -2.07
NUP53Q03790 PAU8YAL068C 363 nt2.11□□□□□ -2.07
NUP53Q03790 PAU20YOL161C 363 nt2.11□□□□□ -2.07
NUP53Q03790 YKU70YMR284W 1809 nt2.11□□□□□ -2.07
NUP53Q03790 ARP8YOR141C 2646 nt2.11□□□□□ -2.07
NUP53Q03790 NUP120YKL057C 3114 nt2.11□□□□□ -2.07
NUP53Q03790 GIP3YPL137C 3831 nt2.1□□□□□ -2.07
NUP53Q03790 FMP16YDR070C 282 nt2.1□□□□□ -2.07
NUP53Q03790 TIM9YEL020W-A 264 nt2.1□□□□□ -2.07
NUP53Q03790 YMR230W-AYMR230W-A 189 nt2.1□□□□□ -2.07
NUP53Q03790 CSE2YNR010W 450 nt2.1□□□□□ -2.07
NUP53Q03790 NUT2YPR168W 474 nt2.1□□□□□ -2.07
NUP53Q03790 PTC5YOR090C 1719 nt2.1□□□□□ -2.07
NUP53Q03790 RRP6YOR001W 2202 nt2.1□□□□□ -2.07
NUP53Q03790 MSB1YOR188W 3414 nt2.09□□□□□ -2.07
NUP53Q03790 PCC1YKR095W-A 267 nt2.09□□□□□ -2.07
NUP53Q03790 YML007C-AYML007C-A 111 nt2.09□□□□□ -2.07
NUP53Q03790 YNL028WYNL028W 318 nt2.09□□□□□ -2.07
NUP53Q03790 VIK1YPL253C 1944 nt2.09□□□□□ -2.08
NUP53Q03790 VPS35YJL154C 2835 nt2.09□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 72.6 ms