Protein–RNA interactions for Protein: Q00916

SNP1, U1 small nuclear ribonucleoprotein 70 kDa homolog, yeastyeast

Predicted RBP Predictions only

Length 300 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNP1Q00916 RPO41YFL036W 4056 nt2.49□□□□□ -2.01
SNP1Q00916 ZRG8YER033C 3231 nt2.49□□□□□ -2.01
SNP1Q00916 YDL062WYDL062W 426 nt2.49□□□□□ -2.01
SNP1Q00916 TIM9YEL020W-A 264 nt2.49□□□□□ -2.01
SNP1Q00916 YGR265WYGR265W 411 nt2.49□□□□□ -2.01
SNP1Q00916 IRR1YIL026C 3453 nt2.49□□□□□ -2.01
SNP1Q00916 PHO2YDL106C 1680 nt2.48□□□□□ -2.01
SNP1Q00916 YFH1YDL120W 525 nt2.48□□□□□ -2.01
SNP1Q00916 YDR426CYDR426C 378 nt2.48□□□□□ -2.01
SNP1Q00916 YGL188C-AYGL188C-A 141 nt2.48□□□□□ -2.01
SNP1Q00916 YHL042WYHL042W 453 nt2.48□□□□□ -2.01
SNP1Q00916 YHR086W-AYHR086W-A 162 nt2.48□□□□□ -2.01
SNP1Q00916 ECM29YHL030W 5607 nt2.48□□□□□ -2.01
SNP1Q00916 CLN3YAL040C 1743 nt2.48□□□□□ -2.01
SNP1Q00916 RAD61YDR014W 1944 nt2.47□□□□□ -2.01
SNP1Q00916 YPR063CYPR063C 423 nt2.47□□□□□ -2.01
SNP1Q00916 VTC3YPL019C 2508 nt2.46□□□□□ -2.01
SNP1Q00916 RPH1YER169W 2391 nt2.46□□□□□ -2.01
SNP1Q00916 SEC26YDR238C 2922 nt2.46□□□□□ -2.02
SNP1Q00916 COS111YBR203W 2775 nt2.46□□□□□ -2.02
SNP1Q00916 NUM1YDR150W 8247 nt2.46□□□□□ -2.02
SNP1Q00916 YCR043CYCR043C 384 nt2.46□□□□□ -2.02
SNP1Q00916 tW(CCA)G1tW(CCA)G1 72 nt2.46□□□□□ -2.02
SNP1Q00916 tW(CCA)G2tW(CCA)G2 72 nt2.46□□□□□ -2.02
SNP1Q00916 tW(CCA)JtW(CCA)J 72 nt2.46□□□□□ -2.02
SNP1Q00916 tW(CCA)KtW(CCA)K 72 nt2.46□□□□□ -2.02
SNP1Q00916 tW(CCA)MtW(CCA)M 72 nt2.46□□□□□ -2.02
SNP1Q00916 tW(CCA)PtW(CCA)P 72 nt2.46□□□□□ -2.02
SNP1Q00916 PHD1YKL043W 1101 nt2.46□□□□□ -2.02
SNP1Q00916 YKL183C-AYKL183C-A 213 nt2.46□□□□□ -2.02
SNP1Q00916 YMR141W-AYMR141W-A 225 nt2.46□□□□□ -2.02
SNP1Q00916 SWI6YLR182W 2412 nt2.46□□□□□ -2.02
SNP1Q00916 MNE1YOR350C 1992 nt2.45□□□□□ -2.02
SNP1Q00916 COG8YML071C 1824 nt2.45□□□□□ -2.02
SNP1Q00916 ESL2YKR096W 3588 nt2.45□□□□□ -2.02
SNP1Q00916 MRP10YDL045W-A 288 nt2.45□□□□□ -2.02
SNP1Q00916 HYP2YEL034W 474 nt2.45□□□□□ -2.02
SNP1Q00916 YLR255CYLR255C 354 nt2.45□□□□□ -2.02
SNP1Q00916 YOR008C-AYOR008C-A 225 nt2.45□□□□□ -2.02
SNP1Q00916 YPR002C-AYPR002C-A 198 nt2.45□□□□□ -2.02
SNP1Q00916 RAV1YJR033C 4074 nt2.45□□□□□ -2.02
SNP1Q00916 YBL005W-BYBL005W-B 5268 nt2.44□□□□□ -2.02
SNP1Q00916 CFT2YLR115W 2580 nt2.44□□□□□ -2.02
SNP1Q00916 YEL020C-BYEL020C-B 198 nt2.44□□□□□ -2.02
SNP1Q00916 snR43snR43 209 nt2.44□□□□□ -2.02
SNP1Q00916 PTP3YER075C 2787 nt2.44□□□□□ -2.02
SNP1Q00916 SMC6YLR383W 3345 nt2.43□□□□□ -2.02
SNP1Q00916 UBP14YBR058C 2346 nt2.43□□□□□ -2.02
SNP1Q00916 YPR097WYPR097W 3222 nt2.43□□□□□ -2.02
SNP1Q00916 SWI5YDR146C 2130 nt2.43□□□□□ -2.02
SNP1Q00916 TRX1YLR043C 312 nt2.43□□□□□ -2.02
SNP1Q00916 JLP2YMR132C 627 nt2.43□□□□□ -2.02
SNP1Q00916 MVP1YMR004W 1536 nt2.42□□□□□ -2.02
SNP1Q00916 MUK1YPL070W 1839 nt2.42□□□□□ -2.02
SNP1Q00916 ATG13YPR185W 2217 nt2.42□□□□□ -2.02
SNP1Q00916 YGR250CYGR250C 2346 nt2.42□□□□□ -2.02
SNP1Q00916 SSQ1YLR369W 1974 nt2.42□□□□□ -2.02
SNP1Q00916 snR80snR80 171 nt2.42□□□□□ -2.02
SNP1Q00916 YIL174WYIL174W 228 nt2.42□□□□□ -2.02
SNP1Q00916 YJL222W-AYJL222W-A 228 nt2.42□□□□□ -2.02
SNP1Q00916 GIP3YPL137C 3831 nt2.42□□□□□ -2.02
SNP1Q00916 snR49snR49 165 nt2.42□□□□□ -2.02
SNP1Q00916 NEW1YPL226W 3591 nt2.42□□□□□ -2.02
SNP1Q00916 PFF1YBR074W 2931 nt2.41□□□□□ -2.02
SNP1Q00916 TRL1YJL087C 2484 nt2.41□□□□□ -2.02
SNP1Q00916 snR60snR60 104 nt2.41□□□□□ -2.02
SNP1Q00916 VPS8YAL002W 3825 nt2.4□□□□□ -2.03
SNP1Q00916 INP2YMR163C 2118 nt2.4□□□□□ -2.03
SNP1Q00916 ARP7YPR034W 1434 nt2.4□□□□□ -2.03
SNP1Q00916 SEC7YDR170C 6030 nt2.4□□□□□ -2.03
SNP1Q00916 AXL1YPR122W 3627 nt2.4□□□□□ -2.03
SNP1Q00916 PHO91YNR013C 2685 nt2.39□□□□□ -2.03
SNP1Q00916 RFX1YLR176C 2436 nt2.39□□□□□ -2.03
SNP1Q00916 tM(CAU)Q1tM(CAU)Q1 76 nt2.39□□□□□ -2.03
SNP1Q00916 PAU18YLL064C 363 nt2.39□□□□□ -2.03
SNP1Q00916 PAU6YNR076W 363 nt2.39□□□□□ -2.03
SNP1Q00916 RTT107YHR154W 3213 nt2.39□□□□□ -2.03
SNP1Q00916 SCW11YGL028C 1629 nt2.39□□□□□ -2.03
SNP1Q00916 MCD1YDL003W 1701 nt2.38□□□□□ -2.03
SNP1Q00916 YHR032W-AYHR032W-A 180 nt2.38□□□□□ -2.03
SNP1Q00916 YHR073W-AYHR073W-A 177 nt2.38□□□□□ -2.03
SNP1Q00916 SDH2YLL041C 801 nt2.38□□□□□ -2.03
SNP1Q00916 YLR278CYLR278C 4026 nt2.38□□□□□ -2.03
SNP1Q00916 PLC1YPL268W 2610 nt2.38□□□□□ -2.03
SNP1Q00916 CDC60YPL160W 3273 nt2.37□□□□□ -2.03
SNP1Q00916 SLY1YDR189W 2001 nt2.37□□□□□ -2.03
SNP1Q00916 YCR102W-AYCR102W-A 198 nt2.37□□□□□ -2.03
SNP1Q00916 EMP24YGL200C 612 nt2.37□□□□□ -2.03
SNP1Q00916 SLN1YIL147C 3663 nt2.37□□□□□ -2.03
SNP1Q00916 RTT101YJL047C 2529 nt2.37□□□□□ -2.03
SNP1Q00916 FLO11YIR019C 4104 nt2.37□□□□□ -2.03
SNP1Q00916 LYS14YDR034C 2373 nt2.37□□□□□ -2.03
SNP1Q00916 HCS1YKL017C 2052 nt2.37□□□□□ -2.03
SNP1Q00916 PDR1YGL013C 3207 nt2.36□□□□□ -2.03
SNP1Q00916 IST2YBR086C 2841 nt2.36□□□□□ -2.03
SNP1Q00916 YJL135WYJL135W 318 nt2.36□□□□□ -2.03
SNP1Q00916 CYB5YNL111C 363 nt2.36□□□□□ -2.03
SNP1Q00916 RPB10YOR210W 213 nt2.36□□□□□ -2.03
SNP1Q00916 YBR064WYBR064W 429 nt2.36□□□□□ -2.03
SNP1Q00916 YCL046WYCL046W 324 nt2.36□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 35 ms