Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.63■□□□□ 0.25
SRPXP78539 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRPXP78539 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SRPXP78539 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRPXP78539 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRPXP78539 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRPXP78539 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRPXP78539 BCL2-203ENST00000589955 5011 ntBASIC16.63■□□□□ 0.25
SRPXP78539 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRPXP78539 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRPXP78539 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SRPXP78539 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SRPXP78539 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRPXP78539 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.62■□□□□ 0.25
SRPXP78539 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
SRPXP78539 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SRPXP78539 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SRPXP78539 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SRPXP78539 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.62■□□□□ 0.25
SRPXP78539 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.62■□□□□ 0.25
SRPXP78539 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.62■□□□□ 0.25
SRPXP78539 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.62■□□□□ 0.25
SRPXP78539 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.62■□□□□ 0.25
SRPXP78539 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRPXP78539 AP000974.1-201ENST00000623909 2387 ntBASIC16.62■□□□□ 0.25
SRPXP78539 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRPXP78539 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.61■□□□□ 0.25
SRPXP78539 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRPXP78539 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRPXP78539 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SRPXP78539 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SRPXP78539 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRPXP78539 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.61■□□□□ 0.25
SRPXP78539 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRPXP78539 AC005332.7-201ENST00000614046 2005 ntBASIC16.61■□□□□ 0.25
SRPXP78539 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.61■□□□□ 0.25
SRPXP78539 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.61■□□□□ 0.25
SRPXP78539 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRPXP78539 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
SRPXP78539 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRPXP78539 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRPXP78539 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRPXP78539 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SRPXP78539 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.6■□□□□ 0.25
SRPXP78539 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.6■□□□□ 0.25
SRPXP78539 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.6■□□□□ 0.25
SRPXP78539 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 AC116050.2-201ENST00000612102 1779 ntBASIC16.6■□□□□ 0.25
SRPXP78539 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.6■□□□□ 0.25
SRPXP78539 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.6■□□□□ 0.25
SRPXP78539 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 MIR4466-201ENST00000606121 54 ntBASIC16.6■□□□□ 0.25
SRPXP78539 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
SRPXP78539 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SRPXP78539 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SRPXP78539 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRPXP78539 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRPXP78539 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.59■□□□□ 0.25
SRPXP78539 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRPXP78539 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.59■□□□□ 0.25
SRPXP78539 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
SRPXP78539 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRPXP78539 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SRPXP78539 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRPXP78539 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRPXP78539 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRPXP78539 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRPXP78539 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.59■□□□□ 0.25
SRPXP78539 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.59■□□□□ 0.25
SRPXP78539 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.59■□□□□ 0.25
SRPXP78539 MIR4767-201ENST00000582827 78 ntBASIC16.59■□□□□ 0.25
SRPXP78539 AC120498.10-201ENST00000621827 505 ntBASIC16.59■□□□□ 0.25
SRPXP78539 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms