Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RPS4XP62701 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
RPS4XP62701 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
RPS4XP62701 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.26■□□□□ 0.51
RPS4XP62701 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.26■□□□□ 0.51
RPS4XP62701 AL050303.2-201ENST00000619798 666 ntBASIC18.26■□□□□ 0.51
RPS4XP62701 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4XP62701 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4XP62701 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4XP62701 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.26■□□□□ 0.51
RPS4XP62701 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.26■□□□□ 0.51
RPS4XP62701 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4XP62701 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.25■□□□□ 0.51
RPS4XP62701 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 AC087633.2-202ENST00000565166 1439 ntBASIC18.25■□□□□ 0.51
RPS4XP62701 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.25■□□□□ 0.51
RPS4XP62701 ABHD17AP1-201ENST00000358206 933 ntBASIC18.25■□□□□ 0.51
RPS4XP62701 SLC29A4P1-201ENST00000398760 971 ntBASIC18.25■□□□□ 0.51
RPS4XP62701 TSPY6P-201ENST00000448518 926 ntBASIC18.25■□□□□ 0.51
RPS4XP62701 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.25■□□□□ 0.51
RPS4XP62701 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 AC142086.2-201ENST00000569753 217 ntBASIC18.25■□□□□ 0.51
RPS4XP62701 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPS4XP62701 AL591742.1-201ENST00000604433 565 ntBASIC18.25■□□□□ 0.51
RPS4XP62701 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RPS4XP62701 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4XP62701 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.24■□□□□ 0.51
RPS4XP62701 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RPS4XP62701 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RPS4XP62701 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 CD99P1-205ENST00000527459 561 ntBASIC18.24■□□□□ 0.51
RPS4XP62701 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.24■□□□□ 0.51
RPS4XP62701 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.24■□□□□ 0.51
RPS4XP62701 AC013268.1-206ENST00000638368 961 ntBASIC18.24■□□□□ 0.51
RPS4XP62701 AC112229.1-201ENST00000639295 961 ntBASIC18.24■□□□□ 0.51
RPS4XP62701 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.24■□□□□ 0.51
RPS4XP62701 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 AFG3L1P-217ENST00000557444 2447 ntBASIC18.24■□□□□ 0.51
RPS4XP62701 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.24■□□□□ 0.51
RPS4XP62701 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4XP62701 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
RPS4XP62701 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.23■□□□□ 0.51
RPS4XP62701 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RPS4XP62701 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 PCDHAC2-203ENST00000615316 3011 ntBASIC18.23■□□□□ 0.51
RPS4XP62701 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.23■□□□□ 0.51
RPS4XP62701 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RPS4XP62701 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 PGM5P4-201ENST00000421970 445 ntBASIC18.23■□□□□ 0.51
RPS4XP62701 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.23■□□□□ 0.51
RPS4XP62701 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.23■□□□□ 0.51
RPS4XP62701 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.23■□□□□ 0.51
RPS4XP62701 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4XP62701 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 DPP3P2-201ENST00000416030 1696 ntBASIC18.22■□□□□ 0.51
RPS4XP62701 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4XP62701 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4XP62701 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4XP62701 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.22■□□□□ 0.51
RPS4XP62701 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.22■□□□□ 0.51
RPS4XP62701 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.22■□□□□ 0.51
RPS4XP62701 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms